Pseudomonas cedrina subsp. cedrina strain DSM 17516

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cedrina subsp. cedrina strain DSM 17516 is characterized by having a single replicon, which is a notable trait for its genetic organization. This unique feature can influence its adaptability and replication processes in various environments. The strain is cataloged under the accession number MNPW00000000.1, providing a reference point for genetic and biochemical studies. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches. Although specific metabolic pathways for strain DSM 17516 are not detailed in the provided data, the genus Pseudomonas is generally associated with the capacity to degrade a variety of organic compounds, which may suggest potential applications in bioremediation and environmental management. The ecological role of Pseudomonas cedrina subsp. cedrina in its native habitat may include interactions with other microorganisms and plants, contributing to nutrient cycling and soil health. Given its single replicon structure, this strain may exhibit efficient regulatory mechanisms for gene expression, which could enhance its survival and adaptability in fluctuating environments. In summary, Pseudomonas cedrina subsp. cedrina strain DSM 17516 exemplifies a microbial entity with a single replicon that may play a significant role in ecological processes, particularly in nutrient cycling and organic matter degradation, although further studies would be necessary to elucidate its specific metabolic capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cedrina
Strainsubsp. cedrina strain DSM 17516

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cedrina subsp. cedrina strain DSM 17516
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cedrina subsp. cedrina strain DSM 17516

Gene Summary

Adenine Count

1274933 bp

Thymine Count

1284122 bp

Guanine Count

1984256 bp

Cytosine Count

1970256 bp

Genome Length

6513568 bp

Protein-coding Genes

5608 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBLL36_10670Not AvailableNegative2321865 - 23220867451.87
damage-inducible protein cinaBLL36_10675Not AvailablePositive2322141 - 232264117620.9
recombinase recaBLL36_10680Not AvailablePositive2322725 - 232378337608.4
recombination regulator recxBLL36_10685Not AvailablePositive2323792 - 232425917974.6
rossman fold protein, tigr00730 familyBLL36_10690Not AvailableNegative2324466 - 232557841875.0
hypothetical proteinBLL36_10695Not AvailableNegative2325866 - 232630016006.7
dtw domain-containing proteinBLL36_10700Not AvailablePositive2326480 - 232719927051.8
dna-binding response regulatorBLL36_10705Not AvailablePositive2327452 - 232810223631.5
diacylglycerol kinaseBLL36_10710Not AvailablePositive2328178 - 232854012922.2
lysr family transcriptional regulatorBLL36_10715Not AvailableNegative2328544 - 232947034272.2

Displaying genes 2271 – 2280 of 5780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.