Bifidobacterium pseudocatenulatum strain 1E

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain 1E is a Gram-positive, anaerobic rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. This species is a significant member of the gut microbiomes, including those specific to infants and the Vietnamese gut microbiota. It possesses flagella, which may contribute to its motility within the gut environment. The strain is characterized by having a single replicon, indicating a streamlined genomic structure that is often associated with bacteria residing in stable environments, such as the gut. Bifidobacterium pseudocatenulatum strain 1E is known to interact with its hosts, Homo sapiens, and is linked to health effects such as pyogenic infections. This suggests that while it is a common inhabitant of the gut, it may also have the potential to contribute to certain pathogenic conditions under specific circumstances. The presence of Bifidobacterium pseudocatenulatum strain 1E in the gut highlights its ecological role in the complex interplay of gut microbiota. Its adaptation to anaerobic conditions and interaction with various host types underscores the importance of such bacteria in maintaining gut health and potentially influencing host immune responses. Understanding the dynamics of this strain could provide insights into its contributions to both health and disease within the gastrointestinal ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain 1E

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain 1E
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain 1E Contig_51, whole

Gene Summary

Adenine Count

515307 bp

Thymine Count

507238 bp

Guanine Count

670616 bp

Cytosine Count

679482 bp

Genome Length

2372656 bp

Protein-coding Genes

1961 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-c crispr-associated protein cas7/csd2BPS1E_0807Not AvailablePositive984658 - 98550330742.9
crispr-associated protein cas4BPS1E_0808Not AvailablePositive985537 - 98621425979.0
subtype i-c crispr-associated endonuclease cas1BPS1E_0809Not AvailablePositive986214 - 98724538830.1
crispr-associated endonuclease cas2BPS1E_0810Not AvailablePositive987313 - 98760311058.4
phospholipase/carboxylesteraseBPS1E_0811Not AvailableNegative992032 - 99270024868.2
aspartate aminotransferaseBPS1E_0812Not AvailableNegative992837 - 99405144528.8
fhur3BPS1E_0813Not AvailableNegative994264 - 99528036894.9
patatin family proteinBPS1E_0814Not AvailableNegative995294 - 99614231348.6
asparaginaseBPS1E_0815Not AvailablePositive996296 - 99723432620.3
abc transporter substrate-binding proteinBPS1E_0816Not AvailableNegative997363 - 99901260351.2

Displaying genes 861 – 870 of 2036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total