Bifidobacterium pseudocatenulatum strain 1E

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain 1E is a Gram-positive, anaerobic rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. This species is a significant member of the gut microbiomes, including those specific to infants and the Vietnamese gut microbiota. It possesses flagella, which may contribute to its motility within the gut environment. The strain is characterized by having a single replicon, indicating a streamlined genomic structure that is often associated with bacteria residing in stable environments, such as the gut. Bifidobacterium pseudocatenulatum strain 1E is known to interact with its hosts, Homo sapiens, and is linked to health effects such as pyogenic infections. This suggests that while it is a common inhabitant of the gut, it may also have the potential to contribute to certain pathogenic conditions under specific circumstances. The presence of Bifidobacterium pseudocatenulatum strain 1E in the gut highlights its ecological role in the complex interplay of gut microbiota. Its adaptation to anaerobic conditions and interaction with various host types underscores the importance of such bacteria in maintaining gut health and potentially influencing host immune responses. Understanding the dynamics of this strain could provide insights into its contributions to both health and disease within the gastrointestinal ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain 1E

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain 1E
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain 1E Contig_51, whole

Gene Summary

Adenine Count

515307 bp

Thymine Count

507238 bp

Guanine Count

670616 bp

Cytosine Count

679482 bp

Genome Length

2372656 bp

Protein-coding Genes

1961 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase catalytic domain-containing proteinBPS1E_0670Not AvailablePositive817205 - 81888760167.8
fe-s cluster assembly protein sufbBPS1E_0671Not AvailablePositive819068 - 82056455687.3
fe-s cluster assembly protein sufdBPS1E_0672Not AvailablePositive820570 - 82179344256.8
abc transporter atp-binding proteinBPS1E_0673Not AvailablePositive821812 - 82259128213.9
cysteine desulfuraseBPS1E_0674Not AvailablePositive822588 - 82386245592.4
iron-sulfur cluster assembly scaffold proteinBPS1E_0675Not AvailablePositive823883 - 82441919307.5
metal-sulfur cluster biosynthetic enzymeBPS1E_0676Not AvailablePositive824563 - 82515021134.9
glucose-1-phosphate adenylyltransferaseBPS1E_0677Not AvailableNegative825352 - 82659645684.1
rrna methyltransferaseBPS1E_0678Not AvailableNegative826744 - 82764633465.1
Trna-leuNot AvailableNot AvailablePositive827675 - 827764Not Available

Displaying genes 721 – 730 of 2036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total