Bifidobacterium pseudocatenulatum strain 1E

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain 1E is a Gram-positive, anaerobic rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. This species is a significant member of the gut microbiomes, including those specific to infants and the Vietnamese gut microbiota. It possesses flagella, which may contribute to its motility within the gut environment. The strain is characterized by having a single replicon, indicating a streamlined genomic structure that is often associated with bacteria residing in stable environments, such as the gut. Bifidobacterium pseudocatenulatum strain 1E is known to interact with its hosts, Homo sapiens, and is linked to health effects such as pyogenic infections. This suggests that while it is a common inhabitant of the gut, it may also have the potential to contribute to certain pathogenic conditions under specific circumstances. The presence of Bifidobacterium pseudocatenulatum strain 1E in the gut highlights its ecological role in the complex interplay of gut microbiota. Its adaptation to anaerobic conditions and interaction with various host types underscores the importance of such bacteria in maintaining gut health and potentially influencing host immune responses. Understanding the dynamics of this strain could provide insights into its contributions to both health and disease within the gastrointestinal ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain 1E

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain 1E
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain 1E Contig_51, whole

Gene Summary

Adenine Count

515307 bp

Thymine Count

507238 bp

Guanine Count

670616 bp

Cytosine Count

679482 bp

Genome Length

2372656 bp

Protein-coding Genes

1961 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell surface proteinBPS1E_1766Not AvailableNegative2177946 - 2185248266707.0
nad-dependent deacetylaseBPS1E_1769Not AvailablePositive2187158 - 218791327546.8
threonine dehydrataseBPS1E_1770Not AvailableNegative2188160 - 218942544973.2
alpha-amylaseBPS1E_1771Not AvailableNegative2189641 - 219146168611.5
abc transporter permeaseBPS1E_1772Not AvailableNegative2191863 - 219274732867.8
sugar abc transporter permeaseBPS1E_1773Not AvailableNegative2192786 - 219372134732.6
abc transporter substrate-binding proteinBPS1E_1774Not AvailableNegative2193736 - 219502847469.4
rok family proteinBPS1E_1775Not AvailablePositive2195246 - 219644842597.1
alpha-galactosidaseBPS1E_1776Not AvailableNegative2196528 - 219884084747.8
cytidine and deoxycytidylate deaminaseBPS1E_1777Not AvailableNegative2199075 - 219950614970.1

Displaying genes 1821 – 1830 of 2036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total