Acidobacteria bacterium 13_1_20CM_2_55_15

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Order

Family

Genus

Description

Acidobacteria bacterium 13_1_20CM_2_55_15 is characterized by having a single replicon, which is a defining trait that may influence its genomic stability and replication dynamics. The organism is cataloged under the accession number MNKP00000000.1, which serves as a unique identifier for its genomic data in public databases. As a member of the Acidobacteria phylum, this bacterium is likely to inhabit various soil environments, where members of this group are often found. Acidobacteria are recognized for their diverse metabolic capabilities and ecological significance in biogeochemical cycles, particularly in soil ecosystems. Their role in the decomposition of organic matter and nutrient cycling underscores their importance in maintaining soil health and fertility. The single replicon characteristic can suggest a streamlined genomic organization, which may confer advantages in specific ecological niches, such as rapid adaptation to environmental changes or resource availability. This trait can also impact the bacterium's growth rates and adaptability, although specific growth data for Acidobacteria bacterium 13_1_20CM_2_55_15 is not provided. In summary, Acidobacteria bacterium 13_1_20CM_2_55_15, with its single replicon and unique accession number, exemplifies the diverse and ecologically significant nature of the Acidobacteria phylum within soil microbiomes. Its traits may reflect adaptations to specific environmental conditions, highlighting the complexity of microbial life in terrestrial ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidobacteria bacterium 13_1_20CM_2_55_15


Gene Summary

Adenine Count

766115 bp

Thymine Count

764073 bp

Guanine Count

956550 bp

Cytosine Count

956000 bp

Genome Length

3444861 bp

Protein-coding Genes

3100 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAUG08_00005Not AvailablePositive1 - 78229315.6
hypothetical proteinAUG08_00010Not AvailablePositive1155 - 216236105.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive2753 - 3154Not Available
atp-binding proteinAUG08_00015Not AvailableNegative2164 - 381059755.8
hypothetical proteinAUG08_00020Not AvailableNegative4071 - 512338676.9
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive5354 - 5451Not Available
hypothetical proteinAUG08_00025Not AvailablePositive5388 - 591218723.5
hypothetical proteinAUG08_00030Not AvailableNegative5955 - 675829585.9
Ncrna_class:otherNot AvailableNot AvailablePositive6886 - 7076Not Available
hypothetical proteinAUG08_00035Not AvailableNegative7011 - 760422996.7

Displaying genes 1 – 10 of 3126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

111 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 111 metabolites

Health Effects

No health effects information available for this bacterium.