Rodentibacter mrazii strain Ppn418

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter mrazii strain Ppn418 is a Gram-negative bacterium characterized by its rod-shaped morphology and microaerophilic oxygen requirement. This strain is non-motile, which indicates a lack of flagella or other structures that typically facilitate movement in bacteria. The genetic makeup of Rodentibacter mrazii Ppn418 comprises a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number MLHG00000000.1, providing a reference for researchers interested in studying its genetic and phenotypic traits. Understanding the characteristics of Rodentibacter mrazii Ppn418 may offer insights into its ecological role, particularly in relation to its habitat and interactions with other microorganisms. As a microaerophile, this bacterium likely occupies environments with limited oxygen availability, which could influence its metabolic processes and ecological interactions. These traits suggest that Rodentibacter mrazii Ppn418 may play a specific role in the microbial communities of its native ecosystem, contributing to nutrient cycling or influencing the dynamics of microbial populations. Further research could elucidate its ecological significance and potential applications in microbiology or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter mrazii
Strainstrain Ppn418

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter mrazii strain Ppn418 contig_136, whole genome

Gene Summary

Adenine Count

742047 bp

Thymine Count

749957 bp

Guanine Count

496452 bp

Cytosine Count

496249 bp

Genome Length

2484705 bp

Protein-coding Genes

2253 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase/fumarate reductase iron-sulfur subunitBKK47_10370Not AvailablePositive2120745 - 212151528567.4
fumarate reductase subunit cBKK47_10375Not AvailablePositive2121526 - 212193615690.9
fumarate reductase subunit dBKK47_10380Not AvailablePositive2121949 - 212229312645.0
nucleoside-diphosphate kinaseBKK47_10385Not AvailableNegative2122356 - 212277815839.8
aminopeptidase pepbBKK47_10390Not AvailableNegative2122787 - 212409147227.8
dtdp-4-dehydrorhamnose 3,5-epimeraseBKK47_10395Not AvailableNegative2124164 - 212470620607.4
dtdp-4-dehydrorhamnose reductaseBKK47_10400Not AvailableNegative2124709 - 212558731906.8
glucose-1-phosphate thymidylyltransferaseBKK47_10405Not AvailableNegative2125588 - 212646032508.0
dtdp-glucose 4,6-dehydrataseBKK47_10410Not AvailableNegative2126531 - 212759839982.2
lysr family transcriptional regulatorBKK47_10420Not AvailableNegative2128402 - 212928934166.9

Displaying genes 2021 – 2030 of 2341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.