Rodentibacter mrazii strain Ppn418

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter mrazii strain Ppn418 is a Gram-negative bacterium characterized by its rod-shaped morphology and microaerophilic oxygen requirement. This strain is non-motile, which indicates a lack of flagella or other structures that typically facilitate movement in bacteria. The genetic makeup of Rodentibacter mrazii Ppn418 comprises a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number MLHG00000000.1, providing a reference for researchers interested in studying its genetic and phenotypic traits. Understanding the characteristics of Rodentibacter mrazii Ppn418 may offer insights into its ecological role, particularly in relation to its habitat and interactions with other microorganisms. As a microaerophile, this bacterium likely occupies environments with limited oxygen availability, which could influence its metabolic processes and ecological interactions. These traits suggest that Rodentibacter mrazii Ppn418 may play a specific role in the microbial communities of its native ecosystem, contributing to nutrient cycling or influencing the dynamics of microbial populations. Further research could elucidate its ecological significance and potential applications in microbiology or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter mrazii
Strainstrain Ppn418

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter mrazii strain Ppn418 contig_136, whole genome

Gene Summary

Adenine Count

742047 bp

Thymine Count

749957 bp

Guanine Count

496452 bp

Cytosine Count

496249 bp

Genome Length

2484705 bp

Protein-coding Genes

2253 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-xylose abc transporter substrate-binding proteinBKK47_06885Not AvailablePositive1402356 - 140335435905.2
xylose abc transporter atp-binding proteinBKK47_06890Not AvailablePositive1403400 - 140491155867.5
sugar abc transporter permeaseBKK47_06895Not AvailablePositive1404916 - 140604339753.0
xylr family transcriptional regulatorBKK47_06900Not AvailablePositive1406116 - 140727944647.4
regulatory protein uhpcBKK47_06905Not AvailablePositive1407422 - 140874749637.9
dna-binding transcriptional repressor deorBKK47_06910Not AvailableNegative1408830 - 140956727439.2
deoxyribose-phosphate aldolaseBKK47_06915Not AvailableNegative1409584 - 141025824121.3
ribokinaseBKK47_06920Not AvailablePositive1410415 - 141134433806.6
l-fucose:h+ symporter permeaseBKK47_06925Not AvailablePositive1411346 - 141263547770.8
duf4432 domain-containing proteinBKK47_06930Not AvailablePositive1412646 - 141366238625.3

Displaying genes 1351 – 1360 of 2341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.