Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter mrazii |
| Strain | strain Ppn418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
742047 bp
Thymine Count
749957 bp
Guanine Count
496452 bp
Cytosine Count
496249 bp
Genome Length
2484705 bp
Protein-coding Genes
2253 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | BKK47_06885 | Not Available | Positive | 1402356 - 1403354 | 35905.2 |
| xylose abc transporter atp-binding protein | BKK47_06890 | Not Available | Positive | 1403400 - 1404911 | 55867.5 |
| sugar abc transporter permease | BKK47_06895 | Not Available | Positive | 1404916 - 1406043 | 39753.0 |
| xylr family transcriptional regulator | BKK47_06900 | Not Available | Positive | 1406116 - 1407279 | 44647.4 |
| regulatory protein uhpc | BKK47_06905 | Not Available | Positive | 1407422 - 1408747 | 49637.9 |
| dna-binding transcriptional repressor deor | BKK47_06910 | Not Available | Negative | 1408830 - 1409567 | 27439.2 |
| deoxyribose-phosphate aldolase | BKK47_06915 | Not Available | Negative | 1409584 - 1410258 | 24121.3 |
| ribokinase | BKK47_06920 | Not Available | Positive | 1410415 - 1411344 | 33806.6 |
| l-fucose:h+ symporter permease | BKK47_06925 | Not Available | Positive | 1411346 - 1412635 | 47770.8 |
| duf4432 domain-containing protein | BKK47_06930 | Not Available | Positive | 1412646 - 1413662 | 38625.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
