Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monothiol glutaredoxin, grx4 family | BKG93_01875 | Not Available | Positive | 381826 - 382152 | 12040.7 |
| thiamine abc transporter substrate binding subunit | BKG93_01880 | Not Available | Positive | 382398 - 383393 | 37332.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | BKG93_01885 | Not Available | Positive | 383400 - 385007 | 60737.0 |
| thiamine abc transporter, atp-binding protein | BKG93_01890 | Not Available | Positive | 385000 - 385629 | 23742.1 |
| biotin synthase biob | BKG93_01895 | Not Available | Positive | 385638 - 386654 | 37515.0 |
| sodium/proline symporter | BKG93_01900 | Not Available | Negative | 386704 - 388194 | 53967.5 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | BKG93_01905 | Not Available | Negative | 388361 - 391813 | 128633.0 |
| thioredoxin | BKG93_01910 | Not Available | Negative | 391991 - 392314 | 11612.2 |
| 2-hydroxyacid dehydrogenase | BKG93_01915 | Not Available | Negative | 392432 - 393427 | 37094.9 |
| cystathionine gamma-synthase | BKG93_01920 | Not Available | Negative | 393444 - 394556 | 40768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
