Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | BKG93_11400 | Not Available | Positive | 2261920 - 2262606 | 25075.6 |
| single-stranded-dna-specific exonuclease recj | BKG93_11405 | Not Available | Positive | 2262683 - 2264410 | 63860.1 |
| hypothetical protein | BKG93_11410 | Not Available | Positive | 2264403 - 2265110 | 27254.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | BKG93_11415 | Not Available | Positive | 2265107 - 2265796 | 23901.0 |
| cytidylate kinase | BKG93_11420 | Not Available | Positive | 2265806 - 2266477 | 24419.3 |
| 30s ribosomal protein s1 | BKG93_11425 | Not Available | Positive | 2266573 - 2268222 | 59509.9 |
| type vi secretion protein | BKG93_11430 | Not Available | Negative | 2268422 - 2272105 | 140993.0 |
| type vi secretion system impa domain-containing protein | BKG93_11435 | Not Available | Negative | 2272102 - 2273358 | 47896.0 |
| pts ascorbate-specific subunit iibc | BKG93_11440 | Not Available | Positive | 2273578 - 2275389 | 65641.4 |
| pts ascorbate-specific transporter subunit iia | BKG93_11445 | Not Available | Positive | 2275467 - 2275934 | 16881.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
