Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | BKG93_08790 | Not Available | Negative | 1763792 - 1766596 | 105235.0 |
| 23s rrna pseudouridine(955/2504/2580) synthase | BKG93_08795 | Not Available | Positive | 1766998 - 1767969 | 36675.8 |
| rna chaperone hfq | BKG93_08800 | Not Available | Positive | 1768062 - 1768340 | 10435.4 |
| gtpase hflx | BKG93_08805 | Not Available | Positive | 1768349 - 1769704 | 50706.2 |
| transcriptional regulator | BKG93_08810 | Not Available | Negative | 1769731 - 1770684 | 36219.4 |
| peptidase m23 | BKG93_08815 | Not Available | Negative | 1770850 - 1772301 | 54293.5 |
| zinc abc transporter atp-binding protein znuc | BKG93_08820 | Not Available | Positive | 1772479 - 1773282 | 29711.0 |
| zinc abc transporter permease | BKG93_08825 | Not Available | Positive | 1773282 - 1774067 | 28285.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | BKG93_08830 | Not Available | Positive | 1774158 - 1775105 | 35091.3 |
| pyridoxal kinase | BKG93_08835 | Not Available | Positive | 1775262 - 1776128 | 31954.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
