Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfoxide reductase, chain b | BKG93_07135 | Not Available | Positive | 1443529 - 1444149 | 22997.4 |
| dimethyl sulfoxide reductase | BKG93_07140 | Not Available | Positive | 1444151 - 1444990 | 30710.4 |
| dmso reductase maturation protein dsmd | BKG93_07145 | Not Available | Positive | 1445045 - 1445656 | 23678.5 |
| ferredoxin-type protein napf | BKG93_07150 | Not Available | Positive | 1445656 - 1446159 | 18351.2 |
| methionine synthase | BKG93_07155 | Not Available | Positive | 1446267 - 1449333 | 112690.0 |
| lytic transglycosylase f | BKG93_07165 | Not Available | Positive | 1451224 - 1452651 | 55011.3 |
| outer membrane protein assembly factor bamd | BKG93_07170 | Not Available | Negative | 1452904 - 1453695 | 29374.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase | BKG93_07175 | Not Available | Positive | 1453806 - 1454780 | 37027.9 |
| multi-copper polyphenol oxidoreductase | BKG93_07180 | Not Available | Positive | 1454782 - 1455516 | 27318.4 |
| holliday junction dna helicase ruva | BKG93_07185 | Not Available | Negative | 1455553 - 1455975 | 15418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
