Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate synthase | BKG93_06385 | Not Available | Negative | 1294089 - 1295126 | 38566.2 |
| shikimate dehydrogenase | BKG93_06390 | Not Available | Negative | 1295129 - 1295758 | 22721.4 |
| chain length determination protein | BKG93_06395 | Not Available | Negative | 1295755 - 1296876 | 41975.5 |
| type i glutamate--ammonia ligase | BKG93_06400 | Not Available | Negative | 1297043 - 1298461 | 52361.5 |
| gtp-binding protein typa | BKG93_06405 | Not Available | Positive | 1298741 - 1300591 | 68447.0 |
| aminotransferase | BKG93_06410 | Not Available | Negative | 1300743 - 1301957 | 45197.8 |
| isochorismate synthase | BKG93_06415 | Not Available | Positive | 1302104 - 1303396 | 48846.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | BKG93_06420 | Not Available | Positive | 1303387 - 1305093 | 63656.3 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | BKG93_06425 | Not Available | Positive | 1305127 - 1305870 | 27919.4 |
| ribosomal subunit interface protein | BKG93_06430 | Not Available | Negative | 1306008 - 1306328 | 12123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
