Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter ratti |
| Strain | strain Ppn157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
720503 bp
Thymine Count
714181 bp
Guanine Count
473328 bp
Cytosine Count
496576 bp
Genome Length
2404588 bp
Protein-coding Genes
2045 genes
Non-Coding Genes
315 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiaminase ii | BKG93_04230 | Not Available | Positive | 873318 - 873965 | 24809.5 |
| hydroxyethylthiazole kinase | BKG93_04235 | Not Available | Positive | 873986 - 874777 | 27512.5 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BKG93_04240 | Not Available | Positive | 874770 - 875585 | 29108.2 |
| thiamine-phosphate diphosphorylase | BKG93_04245 | Not Available | Positive | 875600 - 876268 | 24368.6 |
| metabolite transport protein | BKG93_04250 | Not Available | Positive | 876303 - 877607 | 46764.4 |
| mate family efflux transporter | BKG93_04255 | Not Available | Negative | 877697 - 879091 | 50903.4 |
| riboflavin synthase subunit alpha | BKG93_04260 | Not Available | Positive | 879133 - 879744 | 22470.4 |
| deda family protein | BKG93_04265 | Not Available | Negative | 879796 - 880401 | 23301.4 |
| 50s ribosomal protein l25 | BKG93_04270 | Not Available | Positive | 880612 - 880899 | 10594.8 |
| trna pseudouridine(38-40) synthase trua | BKG93_04275 | Not Available | Positive | 880967 - 881761 | 29975.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
