Rodentibacter ratti strain Ac81

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter ratti strain Ac81 is a rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number MLAG00000000.1, which provides a reference for further genetic and genomic studies. Rodentibacter ratti is part of the larger microbiological study of rodent-associated bacteria, contributing to our understanding of microbial diversity within this ecological niche. The rod shape of the bacterium suggests adaptations for motility, which may play a role in its interactions with host organisms or other microbial communities. The existence of only one replicon in strain Ac81 indicates a streamlined genomic organization, which can be advantageous for rapid replication and adaptability to environmental changes. This trait may reflect evolutionary pressures that favor efficient replication and survival strategies in the habitats typically occupied by rodents. Overall, the study of Rodentibacter ratti strain Ac81 not only enhances our knowledge of bacterial diversity but also underscores the ecological importance of rodent-associated microbes. These bacteria may influence the health of their hosts and contribute to the microbial balance in rodent habitats, thereby playing a role in broader ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter ratti
Strainstrain Ac81

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter ratti strain Ac81 contig_72, whole genome shotgun

Gene Summary

Adenine Count

657251 bp

Thymine Count

655390 bp

Guanine Count

441607 bp

Cytosine Count

438124 bp

Genome Length

2192372 bp

Protein-coding Genes

1991 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorBKG92_09305Not AvailablePositive1941184 - 194207734278.4
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmBKG92_09310Not AvailablePositive1942070 - 194315841847.7
Trna-metNot AvailableNot AvailablePositive1943247 - 1943323Not Available
murein transglycosylase aBKG92_09320Not AvailablePositive1943519 - 194464640930.8
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaBKG92_09325Not AvailablePositive1944646 - 194541327955.0
hypothetical proteinBKG92_09330Not AvailableNegative1945449 - 194600319986.8
hypothetical proteinBKG92_09335Not AvailableNegative1946016 - 194649817838.6
transcriptional regulatorBKG92_09340Not AvailablePositive1946616 - 194694812690.1
zinc abc transporter substrate-binding proteinBKG92_09345Not AvailablePositive1947132 - 194810035656.4
23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferaseBKG92_09350Not AvailablePositive1948221 - 195036881314.0

Displaying genes 1821 – 1830 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.