Rodentibacter ratti strain Ac81

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter ratti strain Ac81 is a rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number MLAG00000000.1, which provides a reference for further genetic and genomic studies. Rodentibacter ratti is part of the larger microbiological study of rodent-associated bacteria, contributing to our understanding of microbial diversity within this ecological niche. The rod shape of the bacterium suggests adaptations for motility, which may play a role in its interactions with host organisms or other microbial communities. The existence of only one replicon in strain Ac81 indicates a streamlined genomic organization, which can be advantageous for rapid replication and adaptability to environmental changes. This trait may reflect evolutionary pressures that favor efficient replication and survival strategies in the habitats typically occupied by rodents. Overall, the study of Rodentibacter ratti strain Ac81 not only enhances our knowledge of bacterial diversity but also underscores the ecological importance of rodent-associated microbes. These bacteria may influence the health of their hosts and contribute to the microbial balance in rodent habitats, thereby playing a role in broader ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter ratti
Strainstrain Ac81

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter ratti strain Ac81 contig_72, whole genome shotgun

Gene Summary

Adenine Count

657251 bp

Thymine Count

655390 bp

Guanine Count

441607 bp

Cytosine Count

438124 bp

Genome Length

2192372 bp

Protein-coding Genes

1991 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBKG92_08880Not AvailablePositive1841610 - 184245532770.5
imidazole glycerol phosphate synthase, glutamine amidotransferase subunitBKG92_08885Not AvailablePositive1842494 - 184308421449.9
gnat family n-acetyltransferaseBKG92_08890Not AvailablePositive1843109 - 184380127229.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseBKG92_08895Not AvailablePositive1843860 - 184460626490.7
imidazole glycerol phosphate synthase subunit hisfBKG92_08900Not AvailablePositive1844588 - 184536128565.1
hypothetical proteinBKG92_08905Not AvailablePositive1845410 - 184599723178.1
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseBKG92_08910Not AvailablePositive1845957 - 184657423154.5
dna gyrase subunit bBKG92_08915Not AvailablePositive1846692 - 184911590200.5
ligand-gated channel proteinBKG92_08920Not AvailablePositive1849273 - 185160088509.0
abc transporter atp-binding proteinBKG92_08925Not AvailablePositive1851673 - 185341864273.1

Displaying genes 1741 – 1750 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.