Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter caecimuris |
| Strain | strain 2002178011 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
745079 bp
Thymine Count
746541 bp
Guanine Count
502320 bp
Cytosine Count
499371 bp
Genome Length
2493311 bp
Protein-coding Genes
2156 genes
Non-Coding Genes
163 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | BKG99_02450 | Not Available | Positive | 509759 - 510577 | 29683.6 |
| dna-3-methyladenine glycosidase | BKG99_02455 | Not Available | Positive | 510574 - 511122 | 20809.1 |
| lps assembly protein lptd | BKG99_02460 | Not Available | Positive | 511170 - 513512 | 89712.2 |
| hypothetical protein | BKG99_02465 | Not Available | Positive | 513569 - 514315 | 28018.2 |
| reactive intermediate/imine deaminase | BKG99_02470 | Not Available | Positive | 514380 - 514769 | 13895.7 |
| 50s ribosomal protein l10 | BKG99_02475 | Not Available | Positive | 515057 - 515548 | 17679.3 |
| 50s ribosomal protein l7/l12 | BKG99_02480 | Not Available | Positive | 515603 - 515974 | 12432.9 |
| dna-directed rna polymerase subunit beta | BKG99_02485 | Not Available | Positive | 516277 - 520305 | 149724.0 |
| dna-directed rna polymerase subunit beta' | BKG99_02490 | Not Available | Positive | 520426 - 524694 | 157781.0 |
| dicarboxylate transporter/tellurite-resistance protein teha | BKG99_02495 | Not Available | Positive | 524871 - 525815 | 35515.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
