Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter caecimuris |
| Strain | strain 2002178011 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
745079 bp
Thymine Count
746541 bp
Guanine Count
502320 bp
Cytosine Count
499371 bp
Genome Length
2493311 bp
Protein-coding Genes
2156 genes
Non-Coding Genes
163 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine repressor | BKG99_00305 | Not Available | Negative | 66830 - 67282 | 16513.0 |
| malate dehydrogenase | BKG99_00310 | Not Available | Positive | 67490 - 68425 | 32595.9 |
| competence protein comea | BKG99_00315 | Not Available | Positive | 68738 - 69307 | 20621.9 |
| 2-oxoglutarate dehydrogenase e1 component | BKG99_00320 | Not Available | Positive | 69495 - 72302 | 106807.0 |
| dihydrolipoamide succinyltransferase | BKG99_00325 | Not Available | Positive | 72414 - 73643 | 45286.4 |
| succinate--coa ligase subunit beta | BKG99_00330 | Not Available | Positive | 73743 - 74909 | 42085.9 |
| succinate--coa ligase subunit alpha | BKG99_00335 | Not Available | Positive | 74912 - 75781 | 29943.5 |
| threonylcarbamoyl-amp synthase | BKG99_00340 | Not Available | Positive | 75905 - 76528 | 23040.9 |
| 23s rrna pseudouridylate synthase | BKG99_00345 | Not Available | Positive | 76718 - 77581 | 32985.2 |
| transcriptional regulator cysb | BKG99_00350 | Not Available | Positive | 77591 - 78562 | 36417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
