Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter caecimuris |
| Strain | strain 2002178011 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
745079 bp
Thymine Count
746541 bp
Guanine Count
502320 bp
Cytosine Count
499371 bp
Genome Length
2493311 bp
Protein-coding Genes
2156 genes
Non-Coding Genes
163 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | BKG99_09445 | Not Available | Negative | 1939076 - 1939996 | 33546.2 |
| deoxyribose-phosphate aldolase | BKG99_09450 | Not Available | Positive | 1940152 - 1940826 | 24170.3 |
| dna-binding transcriptional repressor deor | BKG99_09455 | Not Available | Positive | 1940843 - 1941580 | 27281.1 |
| regulatory protein uhpc | BKG99_09460 | Not Available | Negative | 1941657 - 1942982 | 49640.9 |
| xylr family transcriptional regulator | BKG99_09465 | Not Available | Negative | 1943126 - 1944289 | 44617.5 |
| sugar abc transporter permease | BKG99_09470 | Not Available | Negative | 1944363 - 1945490 | 39743.0 |
| xylose abc transporter atp-binding protein | BKG99_09475 | Not Available | Negative | 1945494 - 1947005 | 55739.4 |
| d-xylose abc transporter substrate-binding protein | BKG99_09480 | Not Available | Negative | 1947051 - 1948049 | 35834.1 |
| xylose isomerase | BKG99_09485 | Not Available | Positive | 1948288 - 1949607 | 49718.9 |
| xylulokinase | BKG99_09490 | Not Available | Positive | 1949664 - 1951145 | 54291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
