Rodentibacter caecimuris strain 2002178011

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris strain 2002178011 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is part of the Rodentibacter genus, which is notable for its association with rodent hosts. The genomic data of strain 2002178011 is available under the accession number MLAD00000000.1, indicating that it has been sequenced and cataloged in a public database. One significant trait of this strain is that it possesses a single replicon, which suggests a streamlined genomic structure. This can be indicative of its evolutionary adaptations and ecological niche, especially in relation to its host organisms. Being Gram-negative, Rodentibacter caecimuris strain 2002178011 likely possesses an outer membrane, which is characteristic of this group and may contribute to its survival and interaction with the host's immune system. The ecological insight drawn from the existence of this strain points to its potential role in the gastrointestinal microbiome of rodents. Such bacteria can have symbiotic relationships with their hosts, aiding in digestion or nutrient absorption. Understanding the traits of Rodentibacter caecimuris strain 2002178011 can provide valuable information about the dynamics of microbial communities in rodent species and their influence on host health and ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
Strainstrain 2002178011

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 2002178011 contig_156, whole

Gene Summary

Adenine Count

745079 bp

Thymine Count

746541 bp

Guanine Count

502320 bp

Cytosine Count

499371 bp

Genome Length

2493311 bp

Protein-coding Genes

2156 genes

Non-Coding Genes

163 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 2BKG99_09240Not AvailableNegative1889882 - 189078433794.6
bifunctional protein-disulfide isomerase/oxidoreductase dsbcBKG99_09245Not AvailablePositive1891113 - 189179925164.7
single-stranded-dna-specific exonuclease recjBKG99_09250Not AvailablePositive1891887 - 189361464190.7
hypothetical proteinBKG99_09255Not AvailablePositive1893607 - 189431427173.3
5'-methylthioadenosine/s-adenosylhomocysteine nucleosidaseBKG99_09260Not AvailablePositive1894311 - 189500023955.9
cytidylate kinaseBKG99_09265Not AvailablePositive1895009 - 189568024254.1
30s ribosomal protein s1BKG99_09270Not AvailablePositive1895776 - 189742559511.0
hypothetical proteinBKG99_09275Not AvailableNegative1897519 - 190011097173.0
hypothetical proteinBKG99_09280Not AvailableNegative1900107 - 190148653895.4
clpv1 family t6ss atpaseBKG99_09285Not AvailableNegative1901600 - 190392185482.6

Displaying genes 1791 – 1800 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.