Rodentibacter caecimuris strain 2002178011

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris strain 2002178011 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is part of the Rodentibacter genus, which is notable for its association with rodent hosts. The genomic data of strain 2002178011 is available under the accession number MLAD00000000.1, indicating that it has been sequenced and cataloged in a public database. One significant trait of this strain is that it possesses a single replicon, which suggests a streamlined genomic structure. This can be indicative of its evolutionary adaptations and ecological niche, especially in relation to its host organisms. Being Gram-negative, Rodentibacter caecimuris strain 2002178011 likely possesses an outer membrane, which is characteristic of this group and may contribute to its survival and interaction with the host's immune system. The ecological insight drawn from the existence of this strain points to its potential role in the gastrointestinal microbiome of rodents. Such bacteria can have symbiotic relationships with their hosts, aiding in digestion or nutrient absorption. Understanding the traits of Rodentibacter caecimuris strain 2002178011 can provide valuable information about the dynamics of microbial communities in rodent species and their influence on host health and ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
Strainstrain 2002178011

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 2002178011 contig_156, whole

Gene Summary

Adenine Count

745079 bp

Thymine Count

746541 bp

Guanine Count

502320 bp

Cytosine Count

499371 bp

Genome Length

2493311 bp

Protein-coding Genes

2156 genes

Non-Coding Genes

163 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome d terminal oxidase subunit 1BKG99_06165Not AvailableNegative1270850 - 127241557959.8
recombinase xerdBKG99_06170Not AvailablePositive1272826 - 127313111168.7
holliday junction dna helicase ruvbBKG99_06175Not AvailableNegative1273197 - 127420437008.7
holliday junction dna helicase ruvaBKG99_06180Not AvailableNegative1274215 - 127482922550.6
crossover junction endodeoxyribonuclease ruvcBKG99_06185Not AvailableNegative1274890 - 127546220683.3
hypothetical proteinBKG99_06190Not AvailableNegative1275526 - 127605318585.2
hypothetical proteinBKG99_06195Not AvailableNegative1276075 - 127681526200.8
dihydroneopterin triphosphate diphosphataseBKG99_06200Not AvailableNegative1276843 - 127731318557.0
rossman fold protein, tigr00730 familyBKG99_06205Not AvailableNegative1277314 - 127787420342.7
hypothetical proteinBKG99_06210Not AvailableNegative1277871 - 127819412901.3

Displaying genes 1271 – 1280 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.