Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter caecimuris |
| Strain | strain 2002178011 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
745079 bp
Thymine Count
746541 bp
Guanine Count
502320 bp
Cytosine Count
499371 bp
Genome Length
2493311 bp
Protein-coding Genes
2156 genes
Non-Coding Genes
163 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccme | BKG99_05405 | Not Available | Negative | 1125800 - 1126324 | 19314.5 |
| heme exporter protein ccmd | BKG99_05410 | Not Available | Negative | 1126321 - 1126524 | 7865.68 |
| heme abc transporter permease | BKG99_05415 | Not Available | Negative | 1126552 - 1127295 | 27751.8 |
| heme exporter protein ccmb | BKG99_05420 | Not Available | Negative | 1127355 - 1128020 | 23845.7 |
| heme abc transporter atp-binding protein ccma | BKG99_05425 | Not Available | Negative | 1128025 - 1128663 | 23698.5 |
| superoxide dismutase | BKG99_05430 | Not Available | Positive | 1128955 - 1129602 | 24115.4 |
| isoprenylcysteine carboxyl methyltransferase | BKG99_05435 | Not Available | Negative | 1129644 - 1130087 | 17530.9 |
| hypothetical protein | BKG99_05440 | Not Available | Negative | 1130117 - 1130731 | 22424.5 |
| histidine--trna ligase | BKG99_05445 | Not Available | Negative | 1130750 - 1132021 | 47743.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BKG99_05450 | Not Available | Negative | 1132031 - 1133137 | 40091.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
