Pseudomonas putida strain GM4FR

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain GM4FR is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as a nonsporulating organism. This strain is known for its heterotrophic metabolism, utilizing organic compounds as energy sources, which allows it to thrive in diverse environments, particularly in soil and wastewater habitats. As a facultative anaerobe, Pseudomonas putida strain GM4FR can adapt to varying oxygen levels, enabling it to survive both in the presence and absence of oxygen. The ecological role of Pseudomonas putida strain GM4FR in soil and wastewater environments is significant, as it contributes to the biodegradation of organic pollutants, thereby playing a vital part in bioremediation processes. Its ability to metabolize a wide range of organic substrates enhances its potential for use in environmental applications aimed at reducing contaminant levels in polluted soils and water systems. This adaptability not only underscores the organism's ecological versatility but also highlights its importance in microbial communities involved in nutrient cycling and organic matter decomposition. Further research could elucidate the specific pathways utilized by this strain in pollutant degradation, thereby enhancing our understanding of its role in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain GM4FR

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain GM4FR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain GM4FR


Gene Summary

Adenine Count

1291889 bp

Thymine Count

1290188 bp

Guanine Count

2230186 bp

Cytosine Count

2251989 bp

Genome Length

7064252 bp

Protein-coding Genes

6119 genes

Non-Coding Genes

235 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1449018 - 1449029Not Available
Zinc-containing alcohol dehydrogenase superfamily proteinPSEMO_12940Not Available+1457535 - 145855735533.3
long-chain-fatty-acid--coa ligase fadd13PSEMO_12950Not Available+1458560 - 145989146754.6
Tail proteinPSEMO_12960Not Available-1459968 - 146039316416.5
Short tail fiber proteinPSEMO_12970Not Available-1460395 - 146160642491.3
Gp25, tail fiberPSEMO_12980Not Available-1461606 - 146218721607.0
Baseplate proteinPSEMO_12990Not Available-1462180 - 146330140271.2
Baseplate wedge subunitPSEMO_13000Not Available-1463285 - 146365914017.7
hypothetical proteinPSEMO_13010Not Available+1463781 - 146439824163.8
Putative baseplate assembly protein vPSEMO_13020Not Available-1464404 - 146493718984.6

Displaying genes 1 – 10 of 6354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites