Paludibacter sp. 47-17

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Paludibacteraceae

Genus

Paludibacter

Description

Paludibacter sp. 47-17 is characterized by having a single replicon, which is significant for its genetic organization. The strain is cataloged under the accession number MKVT00000000.1, indicating that it has been sequenced and made available for further research in microbiology databases. As a member of the genus Paludibacter, this organism is likely to be associated with anaerobic environments, given the genus's known ecological niches. This suggests that Paludibacter sp. 47-17 may play a role in specific biogeochemical processes within its habitat, such as the degradation of organic matter in waterlogged soils or sediments. The presence of a single replicon may also provide insights into the organism's evolutionary adaptations. Such a genetic structure can influence the stability and maintenance of its genome, potentially impacting its metabolic capabilities and interactions within its ecosystem. Overall, understanding the traits of Paludibacter sp. 47-17 can contribute to broader ecological insights into anaerobic microbiomes and their functions in nutrient cycling. The exploration of this strain might reveal its specific roles in environmental processes, further elucidating the complexities of microbial life in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPaludibacteraceae
GenusPaludibacter
SpeciesPaludibacter sp. 47-17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Paludibacter sp. 47-17 scnpilot_p_inoc_scaffold_9494, whole

Gene Summary

Adenine Count

1105257 bp

Thymine Count

1106032 bp

Guanine Count

986494 bp

Cytosine Count

984838 bp

Genome Length

4182621 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amp-dependent synthetaseBGP01_10695Not AvailableNegative4024364 - 402599861152.7
sam-dependent methyltransferaseBGP01_10700Not AvailableNegative4026108 - 402680926015.9
glycosyl transferase family 2BGP01_10705Not AvailableNegative4026815 - 402874973425.3
hypothetical proteinBGP01_10710Not AvailableNegative4028746 - 403068973970.9
3-methyl-2-oxobutanoate hydroxymethyltransferaseBGP01_10715Not AvailablePositive4030818 - 403163629850.4
glucuronate isomeraseBGP01_10720Not AvailablePositive4031875 - 403328154038.4
2-dehydro-3-deoxygluconokinaseBGP01_10725Not AvailablePositive4033400 - 403444337695.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseBGP01_10730Not AvailablePositive4034455 - 403512324058.4
mfs transporterBGP01_10735Not AvailablePositive4035160 - 403667755979.7
hypothetical proteinBGP01_10740Not AvailableNegative4036736 - 403768036641.9

Displaying genes 2981 – 2990 of 3108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.