Paludibacter sp. 47-17

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Paludibacteraceae

Genus

Paludibacter

Description

Paludibacter sp. 47-17 is characterized by having a single replicon, which is significant for its genetic organization. The strain is cataloged under the accession number MKVT00000000.1, indicating that it has been sequenced and made available for further research in microbiology databases. As a member of the genus Paludibacter, this organism is likely to be associated with anaerobic environments, given the genus's known ecological niches. This suggests that Paludibacter sp. 47-17 may play a role in specific biogeochemical processes within its habitat, such as the degradation of organic matter in waterlogged soils or sediments. The presence of a single replicon may also provide insights into the organism's evolutionary adaptations. Such a genetic structure can influence the stability and maintenance of its genome, potentially impacting its metabolic capabilities and interactions within its ecosystem. Overall, understanding the traits of Paludibacter sp. 47-17 can contribute to broader ecological insights into anaerobic microbiomes and their functions in nutrient cycling. The exploration of this strain might reveal its specific roles in environmental processes, further elucidating the complexities of microbial life in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPaludibacteraceae
GenusPaludibacter
SpeciesPaludibacter sp. 47-17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Paludibacter sp. 47-17 scnpilot_p_inoc_scaffold_9494, whole

Gene Summary

Adenine Count

1105257 bp

Thymine Count

1106032 bp

Guanine Count

986494 bp

Cytosine Count

984838 bp

Genome Length

4182621 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBGP01_10590Not AvailableNegative3995835 - 399673135159.8
hypothetical proteinBGP01_10595Not AvailableNegative3996731 - 399831758645.6
mate family efflux transporterBGP01_10600Not AvailablePositive3998499 - 399984248529.8
nicotinate-nucleotide diphosphorylase (carboxylating)BGP01_10605Not AvailableNegative3999829 - 400066830973.6
hypothetical proteinBGP01_10610Not AvailableNegative4000661 - 400105314421.2
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhBGP01_10615Not AvailablePositive4001282 - 400175518021.2
hypothetical proteinBGP01_10620Not AvailablePositive4001764 - 4005174129980.0
s9 family peptidaseBGP01_10625Not AvailablePositive4005230 - 400740183347.5
glucokinaseBGP01_10635Not AvailablePositive4009010 - 400996633824.8
atp-dependent endonucleaseBGP01_10640Not AvailableNegative4010018 - 401141253018.0

Displaying genes 2961 – 2970 of 3108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.