Paludibacter sp. 47-17

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Paludibacteraceae

Genus

Paludibacter

Description

Paludibacter sp. 47-17 is characterized by having a single replicon, which is significant for its genetic organization. The strain is cataloged under the accession number MKVT00000000.1, indicating that it has been sequenced and made available for further research in microbiology databases. As a member of the genus Paludibacter, this organism is likely to be associated with anaerobic environments, given the genus's known ecological niches. This suggests that Paludibacter sp. 47-17 may play a role in specific biogeochemical processes within its habitat, such as the degradation of organic matter in waterlogged soils or sediments. The presence of a single replicon may also provide insights into the organism's evolutionary adaptations. Such a genetic structure can influence the stability and maintenance of its genome, potentially impacting its metabolic capabilities and interactions within its ecosystem. Overall, understanding the traits of Paludibacter sp. 47-17 can contribute to broader ecological insights into anaerobic microbiomes and their functions in nutrient cycling. The exploration of this strain might reveal its specific roles in environmental processes, further elucidating the complexities of microbial life in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPaludibacteraceae
GenusPaludibacter
SpeciesPaludibacter sp. 47-17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Paludibacter sp. 47-17 scnpilot_p_inoc_scaffold_9494, whole

Gene Summary

Adenine Count

1105257 bp

Thymine Count

1106032 bp

Guanine Count

986494 bp

Cytosine Count

984838 bp

Genome Length

4182621 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-independent alpha-mannosidaseBGP01_07100Not AvailablePositive3370671 - 337213155372.3
alpha-mannosidaseBGP01_07105Not AvailablePositive3372202 - 337446985326.8
hypothetical proteinBGP01_07110Not AvailableNegative3374529 - 337535330764.6
fe-s cluster assembly protein sufdBGP01_07115Not AvailableNegative3375394 - 337673451028.1
fe-s cluster assembly atpase sufcBGP01_07120Not AvailableNegative3376747 - 337749927787.5
fe-s cluster assembly protein sufbBGP01_07125Not AvailableNegative3377533 - 337896953014.7
hypothetical proteinBGP01_07130Not AvailableNegative3379188 - 338181296547.9
hypothetical proteinBGP01_07135Not AvailableNegative3381914 - 338314347565.2
sec-independent protein translocase tataBGP01_07140Not AvailablePositive3383303 - 33835007113.06
twin arginine-targeting protein translocase tatcBGP01_07145Not AvailablePositive3383518 - 338431530245.0

Displaying genes 2501 – 2510 of 3108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.