Paludibacter sp. 47-17

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Paludibacteraceae

Genus

Paludibacter

Description

Paludibacter sp. 47-17 is characterized by having a single replicon, which is significant for its genetic organization. The strain is cataloged under the accession number MKVT00000000.1, indicating that it has been sequenced and made available for further research in microbiology databases. As a member of the genus Paludibacter, this organism is likely to be associated with anaerobic environments, given the genus's known ecological niches. This suggests that Paludibacter sp. 47-17 may play a role in specific biogeochemical processes within its habitat, such as the degradation of organic matter in waterlogged soils or sediments. The presence of a single replicon may also provide insights into the organism's evolutionary adaptations. Such a genetic structure can influence the stability and maintenance of its genome, potentially impacting its metabolic capabilities and interactions within its ecosystem. Overall, understanding the traits of Paludibacter sp. 47-17 can contribute to broader ecological insights into anaerobic microbiomes and their functions in nutrient cycling. The exploration of this strain might reveal its specific roles in environmental processes, further elucidating the complexities of microbial life in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPaludibacteraceae
GenusPaludibacter
SpeciesPaludibacter sp. 47-17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Paludibacter sp. 47-17 scnpilot_p_inoc_scaffold_9494, whole

Gene Summary

Adenine Count

1105257 bp

Thymine Count

1106032 bp

Guanine Count

986494 bp

Cytosine Count

984838 bp

Genome Length

4182621 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseBGP01_09015Not AvailablePositive3043194 - 304499366556.1
hypothetical proteinBGP01_09020Not AvailablePositive3045035 - 304548116038.4
alanine--trna ligaseBGP01_09025Not AvailableNegative3045583 - 304820197228.9
peptidase m23BGP01_09030Not AvailablePositive3048303 - 304927137211.6
glucose-6-phosphate isomeraseBGP01_09035Not AvailableNegative3049328 - 305067148968.6
glycerol-3-phosphate dehydrogenaseBGP01_09040Not AvailableNegative3050684 - 305167937590.4
susd and ragb outer membrane lipoprotein domain proteinBGP01_09050Not AvailableNegative3053335 - 305524570990.6
susc/raga family proteinBGP01_09055Not AvailableNegative3055259 - 3058366112212.0
hypothetical proteinBGP01_09060Not AvailablePositive3059807 - 306044223698.3
hypothetical proteinBGP01_09065Not AvailablePositive3060630 - 306153832850.9

Displaying genes 2281 – 2290 of 3108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.