Paludibacter sp. 47-17

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Paludibacteraceae

Genus

Paludibacter

Description

Paludibacter sp. 47-17 is characterized by having a single replicon, which is significant for its genetic organization. The strain is cataloged under the accession number MKVT00000000.1, indicating that it has been sequenced and made available for further research in microbiology databases. As a member of the genus Paludibacter, this organism is likely to be associated with anaerobic environments, given the genus's known ecological niches. This suggests that Paludibacter sp. 47-17 may play a role in specific biogeochemical processes within its habitat, such as the degradation of organic matter in waterlogged soils or sediments. The presence of a single replicon may also provide insights into the organism's evolutionary adaptations. Such a genetic structure can influence the stability and maintenance of its genome, potentially impacting its metabolic capabilities and interactions within its ecosystem. Overall, understanding the traits of Paludibacter sp. 47-17 can contribute to broader ecological insights into anaerobic microbiomes and their functions in nutrient cycling. The exploration of this strain might reveal its specific roles in environmental processes, further elucidating the complexities of microbial life in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPaludibacteraceae
GenusPaludibacter
SpeciesPaludibacter sp. 47-17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Paludibacter sp. 47-17 scnpilot_p_inoc_scaffold_9494, whole

Gene Summary

Adenine Count

1105257 bp

Thymine Count

1106032 bp

Guanine Count

986494 bp

Cytosine Count

984838 bp

Genome Length

4182621 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadBGP01_05225Not AvailableNegative1897801 - 189882936478.0
hypothetical proteinBGP01_05230Not AvailablePositive1899193 - 1903389157937.0
50s ribosomal protein l31BGP01_05235Not AvailableNegative1903555 - 19038129686.59
trna pseudouridine(38-40) synthase truaBGP01_05240Not AvailableNegative1903892 - 190463528181.8
acetylgalactosaminidaseBGP01_05245Not AvailablePositive1904776 - 190615251641.1
n-acetylneuraminate lyaseBGP01_05250Not AvailableNegative1906301 - 190721833356.4
alpha-mannosidaseBGP01_05255Not AvailableNegative1907292 - 190953584814.5
beta-n-acetylhexosaminidaseBGP01_05260Not AvailableNegative1909589 - 191155374100.4
alpha-mannosidaseBGP01_05265Not AvailableNegative1911567 - 191382284836.4
beta-n-acetylhexosaminidaseBGP01_05270Not AvailableNegative1914900 - 191721285909.0

Displaying genes 1421 – 1430 of 3108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.