Caedibacter sp. 38-128

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Fastidiosibacteraceae

Genus

Caedibacter

Description

Caedibacter sp. 38-128 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in replicating under specific environmental conditions. The organism is cataloged under the accession number MKUU00000000.1, which serves as a reference for genomic and taxonomic studies related to this bacterium. The simplicity of having one replicon can be significant in understanding the bacterium's metabolic processes and ecological interactions. In microbial ecology, organisms with fewer replicons are often more specialized, which can affect their roles within different ecosystems. This specialization can lead to unique interactions with host organisms, particularly in symbiotic or pathogenic relationships. Given the nature of Caedibacter sp. and its specialized traits, studying its interactions within its ecological niche may provide insights into microbial community dynamics and the evolution of symbiotic relationships. Understanding these dynamics can further illuminate the roles such bacteria play in broader environmental contexts, such as nutrient cycling or ecosystem stability. The single-replicon nature of Caedibacter sp. 38-128 may suggest its evolutionary adaptations to specific niches, highlighting how microbial organisms can thrive in diverse environments through specialized genomic characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFastidiosibacteraceae
GenusCaedibacter
SpeciesCaedibacter sp. 38-128
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Caedibacter sp. 38-128 SCNpilot_expt_500_p_scaffold_994,

Gene Summary

Adenine Count

608231 bp

Thymine Count

603275 bp

Guanine Count

370912 bp

Cytosine Count

375303 bp

Genome Length

1957730 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease phBGO76_00800Not AvailableNegative1056632 - 105735126198.4
heat-inducible transcriptional repressor hrcaBGO76_00805Not AvailablePositive1057430 - 105846437547.6
nucleotide exchange factor grpeBGO76_00810Not AvailablePositive1058476 - 105907522333.1
Trna-glyNot AvailableNot AvailablePositive1059119 - 1059192Not Available
dihydrolipoyl dehydrogenaseBGO76_00820Not AvailableNegative1059212 - 106062150822.8
dihydrolipoamide succinyltransferaseBGO76_00825Not AvailableNegative1060624 - 106187446613.5
2-oxoglutarate dehydrogenase e1 componentBGO76_00830Not AvailableNegative1061887 - 1064727106574.0
hypothetical proteinBGO76_00835Not AvailablePositive1065676 - 106610415973.0
succinate--coa ligase subunit alphaBGO76_00840Not AvailableNegative1066204 - 106708830484.9
succinate--coa ligase subunit betaBGO76_00845Not AvailableNegative1067090 - 106825941682.7

Displaying genes 951 – 960 of 1760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.