Caedibacter sp. 38-128

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Fastidiosibacteraceae

Genus

Caedibacter

Description

Caedibacter sp. 38-128 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in replicating under specific environmental conditions. The organism is cataloged under the accession number MKUU00000000.1, which serves as a reference for genomic and taxonomic studies related to this bacterium. The simplicity of having one replicon can be significant in understanding the bacterium's metabolic processes and ecological interactions. In microbial ecology, organisms with fewer replicons are often more specialized, which can affect their roles within different ecosystems. This specialization can lead to unique interactions with host organisms, particularly in symbiotic or pathogenic relationships. Given the nature of Caedibacter sp. and its specialized traits, studying its interactions within its ecological niche may provide insights into microbial community dynamics and the evolution of symbiotic relationships. Understanding these dynamics can further illuminate the roles such bacteria play in broader environmental contexts, such as nutrient cycling or ecosystem stability. The single-replicon nature of Caedibacter sp. 38-128 may suggest its evolutionary adaptations to specific niches, highlighting how microbial organisms can thrive in diverse environments through specialized genomic characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFastidiosibacteraceae
GenusCaedibacter
SpeciesCaedibacter sp. 38-128
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Caedibacter sp. 38-128 SCNpilot_expt_500_p_scaffold_994,

Gene Summary

Adenine Count

608231 bp

Thymine Count

603275 bp

Guanine Count

370912 bp

Cytosine Count

375303 bp

Genome Length

1957730 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseBGO76_07930Not AvailablePositive1829503 - 183087649628.1
glutamine--fructose-6-phosphate aminotransferaseBGO76_07935Not AvailablePositive1830877 - 183270666478.0
50s ribosomal protein l28BGO76_07940Not AvailablePositive1832792 - 183307910736.2
hypothetical proteinBGO76_07945Not AvailablePositive1833211 - 183391826259.8
trna guanosine(34) transglycosylase tgtBGO76_07950Not AvailablePositive1833890 - 183510445473.6
hypothetical proteinBGO76_07955Not AvailableNegative1835132 - 183594431438.1
hypothetical proteinBGO76_07960Not AvailableNegative1835896 - 183651023084.6
Trna-leuNot AvailableNot AvailablePositive1836725 - 1836810Not Available
hypothetical proteinBGO76_07970Not AvailableNegative1836922 - 183794739719.6
16s rrna (guanine(966)-n(2))-methyltransferase rsmdBGO76_07975Not AvailableNegative1838038 - 183859220928.3

Displaying genes 1641 – 1650 of 1760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.