Nitrobacter sp. 62-23

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter sp. 62-23 is a Gram-negative bacterium characterized by the presence of flagella, which likely aids in its motility. This species has a single replicon, indicating that it has a streamlined genomic organization. The genomic sequence of Nitrobacter sp. 62-23 is accessible under the accession number MKSM00000000.1. As a member of the genus Nitrobacter, this bacterium plays a crucial role in the nitrogen cycle, specifically in the process of nitrification. Nitrification involves the oxidation of nitrite to nitrate, and members of the Nitrobacter genus are known to contribute significantly to this process in various ecosystems. The presence of flagella may enhance its ability to navigate through soil and aquatic environments to effectively carry out its ecological functions. Ecologically, Nitrobacter sp. 62-23 likely contributes to soil fertility and plant growth by facilitating the conversion of nitrogen compounds into forms that are more accessible to plants. This process is vital for maintaining healthy ecosystems and agricultural productivity. The understanding of such specific traits, including its Gram-negative nature and motility, underlines the importance of Nitrobacter sp. 62-23 in microbial communities involved in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter sp. 62-23
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrobacter sp. 62-23 SCNpilot_cont_300_bf_scaffold_978,

Gene Summary

Adenine Count

723267 bp

Thymine Count

715786 bp

Guanine Count

1172769 bp

Cytosine Count

1181410 bp

Genome Length

3794033 bp

Protein-coding Genes

3287 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16BGO16_06445Not AvailableNegative3542747 - 354307912313.0
signal recognition particle proteinBGO16_06450Not AvailableNegative3543265 - 354480654900.8
simpl domain-containing proteinBGO16_06455Not AvailableNegative3545180 - 354588724197.9
arac family transcriptional regulatorBGO16_06460Not AvailableNegative3545896 - 354662726013.0
diaminopimelate epimeraseBGO16_06465Not AvailablePositive3546909 - 354778131408.4
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabBGO16_06470Not AvailablePositive3547781 - 354905846140.8
histidine kinaseBGO16_06475Not AvailablePositive3549352 - 355102261207.6
rna polymerase subunit sigmaBGO16_06480Not AvailableNegative3551081 - 355162619963.5
hypothetical proteinBGO16_06485Not AvailableNegative3551626 - 35518447822.11
response regulatorBGO16_06490Not AvailablePositive3552106 - 355291229350.3

Displaying genes 3141 – 3150 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.