Nitrobacter sp. 62-23

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter sp. 62-23 is a Gram-negative bacterium characterized by the presence of flagella, which likely aids in its motility. This species has a single replicon, indicating that it has a streamlined genomic organization. The genomic sequence of Nitrobacter sp. 62-23 is accessible under the accession number MKSM00000000.1. As a member of the genus Nitrobacter, this bacterium plays a crucial role in the nitrogen cycle, specifically in the process of nitrification. Nitrification involves the oxidation of nitrite to nitrate, and members of the Nitrobacter genus are known to contribute significantly to this process in various ecosystems. The presence of flagella may enhance its ability to navigate through soil and aquatic environments to effectively carry out its ecological functions. Ecologically, Nitrobacter sp. 62-23 likely contributes to soil fertility and plant growth by facilitating the conversion of nitrogen compounds into forms that are more accessible to plants. This process is vital for maintaining healthy ecosystems and agricultural productivity. The understanding of such specific traits, including its Gram-negative nature and motility, underlines the importance of Nitrobacter sp. 62-23 in microbial communities involved in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter sp. 62-23
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrobacter sp. 62-23 SCNpilot_cont_300_bf_scaffold_978,

Gene Summary

Adenine Count

723267 bp

Thymine Count

715786 bp

Guanine Count

1172769 bp

Cytosine Count

1181410 bp

Genome Length

3794033 bp

Protein-coding Genes

3287 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps abc transporter substrate-binding protein lptaBGO16_11990Not AvailablePositive3227584 - 322826123582.4
lps export abc transporter atp-binding proteinBGO16_11995Not AvailablePositive3228470 - 322946236024.4
hypothetical proteinBGO16_12000Not AvailableNegative3229525 - 322980910796.4
dna-directed rna polymerase subunit nBGO16_12005Not AvailablePositive3230042 - 323041912581.3
rna polymerase sigma-54 factorBGO16_12010Not AvailablePositive3230622 - 323226559599.9
ribosomal subunit interface proteinBGO16_12015Not AvailablePositive3232322 - 323291821510.4
pts iia-like nitrogen-regulatory protein ptsnBGO16_12020Not AvailablePositive3233272 - 323373316618.4
hypothetical proteinBGO16_12025Not AvailableNegative3234130 - 323504432533.2
iron abc transporter permeaseBGO16_12030Not AvailableNegative3235243 - 323633140092.1
abc transporter permeaseBGO16_12035Not AvailableNegative3236321 - 323878087909.6

Displaying genes 2871 – 2880 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.