Nitrobacter sp. 62-23

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter sp. 62-23 is a Gram-negative bacterium characterized by the presence of flagella, which likely aids in its motility. This species has a single replicon, indicating that it has a streamlined genomic organization. The genomic sequence of Nitrobacter sp. 62-23 is accessible under the accession number MKSM00000000.1. As a member of the genus Nitrobacter, this bacterium plays a crucial role in the nitrogen cycle, specifically in the process of nitrification. Nitrification involves the oxidation of nitrite to nitrate, and members of the Nitrobacter genus are known to contribute significantly to this process in various ecosystems. The presence of flagella may enhance its ability to navigate through soil and aquatic environments to effectively carry out its ecological functions. Ecologically, Nitrobacter sp. 62-23 likely contributes to soil fertility and plant growth by facilitating the conversion of nitrogen compounds into forms that are more accessible to plants. This process is vital for maintaining healthy ecosystems and agricultural productivity. The understanding of such specific traits, including its Gram-negative nature and motility, underlines the importance of Nitrobacter sp. 62-23 in microbial communities involved in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter sp. 62-23
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrobacter sp. 62-23 SCNpilot_cont_300_bf_scaffold_978,

Gene Summary

Adenine Count

723267 bp

Thymine Count

715786 bp

Guanine Count

1172769 bp

Cytosine Count

1181410 bp

Genome Length

3794033 bp

Protein-coding Genes

3287 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBGO16_06290Not AvailablePositive3002540 - 300352035439.9
ligand-gated channelBGO16_06295Not AvailablePositive3003781 - 300627690563.0
yggs family pyridoxal phosphate enzymeBGO16_06300Not AvailableNegative3006351 - 300703423900.9
glutathione s-transferaseBGO16_06305Not AvailableNegative3007479 - 300818326577.0
50s ribosomal protein l14BGO16_01280Not AvailablePositive3008410 - 300868910129.6
50s ribosomal protein l24BGO16_01285Not AvailablePositive3008689 - 300900311271.8
50s ribosomal protein l5BGO16_01290Not AvailablePositive3009192 - 300972219825.9
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferaseBGO16_15940Not AvailableNegative3010882 - 301201939531.3
pyruvate dehydrogenase complex e1 component subunit betaBGO16_15945Not AvailableNegative3012034 - 301344950370.5
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaBGO16_15950Not AvailableNegative3013476 - 301449837542.5

Displaying genes 2671 – 2680 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.