Nitrobacter sp. 62-23

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter sp. 62-23 is a Gram-negative bacterium characterized by the presence of flagella, which likely aids in its motility. This species has a single replicon, indicating that it has a streamlined genomic organization. The genomic sequence of Nitrobacter sp. 62-23 is accessible under the accession number MKSM00000000.1. As a member of the genus Nitrobacter, this bacterium plays a crucial role in the nitrogen cycle, specifically in the process of nitrification. Nitrification involves the oxidation of nitrite to nitrate, and members of the Nitrobacter genus are known to contribute significantly to this process in various ecosystems. The presence of flagella may enhance its ability to navigate through soil and aquatic environments to effectively carry out its ecological functions. Ecologically, Nitrobacter sp. 62-23 likely contributes to soil fertility and plant growth by facilitating the conversion of nitrogen compounds into forms that are more accessible to plants. This process is vital for maintaining healthy ecosystems and agricultural productivity. The understanding of such specific traits, including its Gram-negative nature and motility, underlines the importance of Nitrobacter sp. 62-23 in microbial communities involved in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter sp. 62-23
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrobacter sp. 62-23 SCNpilot_cont_300_bf_scaffold_978,

Gene Summary

Adenine Count

723267 bp

Thymine Count

715786 bp

Guanine Count

1172769 bp

Cytosine Count

1181410 bp

Genome Length

3794033 bp

Protein-coding Genes

3287 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair protein radaBGO16_14605Not AvailablePositive2340491 - 234194250282.3
colicin v synthesis proteinBGO16_14610Not AvailablePositive2342137 - 234276622639.0
amidophosphoribosyltransferaseBGO16_14615Not AvailablePositive2342869 - 234437154406.0
methyltransferaseBGO16_14620Not AvailableNegative2344382 - 234500522468.5
gnat family n-acetyltransferaseBGO16_14625Not AvailableNegative2345084 - 234561419259.5
oxidoreductaseBGO16_14630Not AvailablePositive2345727 - 234647026213.7
ribosome biogenesis gtpase derBGO16_14635Not AvailableNegative2346870 - 234825250565.2
hypothetical proteinBGO16_14640Not AvailableNegative2348449 - 234897017792.9
hypothetical proteinBGO16_14645Not AvailableNegative2349010 - 234966323563.8
3-methyl-2-oxobutanoate hydroxymethyltransferaseBGO16_14650Not AvailableNegative2349817 - 235064129392.8

Displaying genes 2081 – 2090 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.