Kocuria sp. CNJ-770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Kocuria

Description

Kocuria sp. CNJ-770 is a Gram-positive bacterium characterized by the presence of flagella, which suggests it has motility capabilities. The organism has a single replicon, indicating a streamlined genomic structure. The specific accession for Kocuria sp. CNJ-770 is MKJW00000000.1, which allows for further genomic analysis and reference. The presence of flagella in Kocuria sp. CNJ-770 may enable it to navigate its environment, potentially influencing its ecological interactions and adaptability. As a member of the Kocuria genus, this bacterium may play a role in various biological processes, such as decomposition or nutrient cycling, especially in the environments where it is found. Understanding the characteristics of Kocuria sp. CNJ-770 can provide insights into its ecological roles, particularly in microbial communities and their functions within specific ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusKocuria
SpeciesKocuria sp. CNJ-770
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kocuria sp. CNJ-770 NODE_9_length_82044_cov_159.871_ID_5037, whole

Gene Summary

Adenine Count

554624 bp

Thymine Count

550660 bp

Guanine Count

1470696 bp

Cytosine Count

1477387 bp

Genome Length

4123079 bp

Protein-coding Genes

3245 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit deltaBJF77_16490Not AvailablePositive3565308 - 356559511031.9
ferredoxinBJF77_16495Not AvailablePositive3565613 - 3568507102557.0
sarcosine oxidase subunit gammaBJF77_16500Not AvailablePositive3568500 - 356918923534.9
l-serine ammonia-lyaseBJF77_16505Not AvailablePositive3569189 - 357059249206.6
formyltetrahydrofolate deformylaseBJF77_16510Not AvailablePositive3570615 - 357148732535.2
zn-dependent hydrolaseBJF77_16515Not AvailableNegative3571718 - 357239824291.3
hypothetical proteinBJF77_16520Not AvailableNegative3572395 - 35726047174.51
dna polymerase iii subunit epsilonBJF77_16525Not AvailablePositive3572958 - 357361423876.0
glutamate-1-semialdehyde-2,1-aminomutaseBJF77_16530Not AvailableNegative3573637 - 357495345551.1
delta-aminolevulinic acid dehydrataseBJF77_16535Not AvailableNegative3575007 - 357601736275.1

Displaying genes 2841 – 2850 of 3298 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

372 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 372 metabolites

Health Effects

No health effects information available for this bacterium.