Aeromonas sobria strain 08005

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas sobria strain 08005 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain contains a single replicon, indicating a streamlined genetic structure that may influence its adaptability and replication efficiency in various environments. A. sobria has been identified as associated with specific aquatic hosts, namely Oncorhynchus mykiss (rainbow trout) and Acipenser sturio (European sturgeon). This host specificity suggests that the bacterium may play a role in the health and ecology of these fish species, potentially affecting their microbiomes or contributing to disease dynamics. The interaction between A. sobria and its aquatic hosts may also provide insights into the health management of these species, especially in aquaculture practices. The genetic information for A. sobria strain 08005 is cataloged under the accession number MKFU00000000.1, which allows for further research and comparison with other strains within the Aeromonas genus. Understanding the characteristics and behaviors of Aeromonas sobria can shed light on its ecological roles and potential implications for fish health, particularly in environments where these fish are cultivated or found in the wild.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas sobria
Strainstrain 08005

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Acipenser sturio
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aeromonas sobria strain 08005 contig9, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4026 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome silencing factorBJD16_14465Not AvailablePositive2381401 - 238174212411.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhBJD16_14470Not AvailablePositive2381763 - 238223017262.9
penicillin-binding protein 2BJD16_14475Not AvailablePositive2382286 - 238420871308.4
rod shape-determining protein rodaBJD16_14480Not AvailablePositive2384322 - 238542540543.4
lytic murein transglycosylase bBJD16_14485Not AvailablePositive2385425 - 238642337097.4
hypothetical proteinBJD16_14490Not AvailablePositive2386365 - 238734834895.8
d-alanyl-d-alanine carboxypeptidaseBJD16_14495Not AvailablePositive2387532 - 238872843622.3
hypothetical proteinBJD16_14500Not AvailablePositive2389002 - 23892659753.85
octanoyltransferaseBJD16_14505Not AvailablePositive2389317 - 238999424517.6
lipoyl synthaseBJD16_14510Not AvailablePositive2390093 - 239105836465.4

Displaying genes 2121 – 2130 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.