Vibrio rotiferianus strain HM-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio rotiferianus strain HM-10 is a marine bacterium characterized by a single replicon, which is significant for its genetic organization and stability. The strain is cataloged under the accession number MKFT00000000.1, indicating that its genomic sequence has been documented and is accessible for further study. As a member of the Vibrio genus, V. rotiferianus is likely to exhibit traits typical of marine vibrios, such as adaptability to saline environments and potential interactions with marine organisms. These bacteria are known for their diverse metabolic capabilities, which may play a role in nutrient cycling within marine ecosystems. The habitat of V. rotiferianus strain HM-10 underscores its ecological significance in marine environments, where it may contribute to the microbiome of various marine organisms or participate in biogeochemical processes. The presence of this bacterium in marine habitats suggests a role in the ecosystem, potentially influencing the health of marine life and nutrient dynamics. In summary, Vibrio rotiferianus strain HM-10 is a single-replicon marine bacterium with documented genomic information. Its existence in marine environments points to its likely involvement in ecological processes, highlighting the importance of such microorganisms in maintaining the balance and health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio rotiferianus
Strainstrain HM-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio rotiferianus strain HM-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio rotiferianus strain HM-10 contig9, whole genome shotgun

Gene Summary

Adenine Count

1460757 bp

Thymine Count

1465504 bp

Guanine Count

1209308 bp

Cytosine Count

1155644 bp

Genome Length

5291213 bp

Protein-coding Genes

4653 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-(glutamine-n5) methyltransferase, release factor-specificBI375_13410Not AvailablePositive1171730 - 117258731416.1
hypothetical proteinBI375_13415Not AvailablePositive1172628 - 117301114118.2
hypothetical proteinBI375_13420Not AvailablePositive1173017 - 117382631242.1
3-deoxy-8-phosphooctulonate synthaseBI375_13425Not AvailablePositive1173881 - 117473230754.1
bifunctional udp-sugar hydrolase/5'-nucleotidaseBI375_13430Not AvailablePositive1175058 - 117671961265.4
aminoacyl-trna deacylaseBI375_13435Not AvailablePositive1176811 - 117728416914.7
23s rrna pseudouridine synthase fBI375_13440Not AvailableNegative1177347 - 117850143095.3
dna mismatch repair protein mutsBI375_13445Not AvailableNegative1178605 - 117918622409.0
duf3149 domain-containing proteinBI375_13450Not AvailableNegative1179320 - 11794605191.53
Trna-proNot AvailableNot AvailablePositive1179721 - 1179797Not Available

Displaying genes 1021 – 1030 of 4736 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.