Photobacterium proteolyticum strain 13-12

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium proteolyticum strain 13-12 is a Gram-negative, rod-shaped bacterium characterized by its facultative aerobic and anaerobic metabolic capabilities. This strain does not form spores and thrives optimally at a temperature of 29.0°C, indicating a preference for mesophilic conditions. Its ability to grow in both the presence and absence of oxygen suggests a versatile metabolic adaptability, allowing it to occupy various ecological niches. The unique combination of traits exhibited by Photobacterium proteolyticum strain 13-12 may contribute to its role in nutrient cycling within its environment, as its proteolytic nature could facilitate the breakdown of organic matter. This process not only aids in the recycling of nutrients but also enhances the availability of amino acids and other compounds essential for the growth of surrounding microorganisms. The bacterium's adaptability to different oxygen levels further underscores its potential significance in diverse ecosystems, where varying conditions may affect the dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium proteolyticum
Strainstrain 13-12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium proteolyticum strain 13-12


Gene Summary

Adenine Count

1690312 bp

Thymine Count

1685383 bp

Guanine Count

1555136 bp

Cytosine Count

1553421 bp

Genome Length

6484429 bp

Protein-coding Genes

5458 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative transcription regulatorBIT28_10720Not Available+5982171 - 598255114561.7
hypothetical proteinBIT28_10725Not Available-5982579 - 598306417835.3
hypothetical proteinBIT28_10730Not Available-5983213 - 598440046186.9
Putative assembly proteinBIT28_10735Not Available-5985310 - 598670751883.9
Hypothetical proteinBIT28_10740Not Available-5986709 - 598705313166.3
1_nc_021795: putative phage tail fiberBIT28_10745Not Available-5987055 - 598877356165.8
Vpf81BIT28_10750Not Available-5989182 - 59894067549.39
Vpf76BIT28_10755Not Available-5989422 - 59896528228.01
Hypothetical proteinBIT28_10760Not Available-5989656 - 598999112516.9
Dna replication initiation proteinBIT28_10765Not Available-5990003 - 599107640205.3

Displaying genes 1 – 10 of 5622 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites