Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VL119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336104 bp
Thymine Count
1342140 bp
Guanine Count
1359106 bp
Cytosine Count
1368369 bp
Genome Length
5405719 bp
Protein-coding Genes
4798 genes
Non-Coding Genes
446 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BHF46_00090 | Not Available | Positive | 16004 - 16159 | 6229.83 |
| rna polymerase sigma factor rpoe | BHF46_00095 | Not Available | Positive | 16156 - 16731 | 21697.0 |
| anti-sigma factor | BHF46_00100 | Not Available | Positive | 16764 - 17414 | 24322.8 |
| sigma-e factor regulatory protein rseb | BHF46_00105 | Not Available | Positive | 17414 - 18370 | 35751.8 |
| soxr reducing system protein rsec | BHF46_00110 | Not Available | Positive | 18367 - 18846 | 16592.3 |
| elongation factor 4 | BHF46_00115 | Not Available | Positive | 19044 - 20843 | 66574.1 |
| s26 family signal peptidase | BHF46_00120 | Not Available | Positive | 20859 - 21833 | 35948.3 |
| ribonuclease iii | BHF46_00125 | Not Available | Positive | 22106 - 22786 | 25551.6 |
| gtpase era | BHF46_00130 | Not Available | Positive | 22783 - 23688 | 33812.1 |
| dna repair protein reco | BHF46_00135 | Not Available | Positive | 23700 - 24428 | 27392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





