Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VL119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336104 bp
Thymine Count
1342140 bp
Guanine Count
1359106 bp
Cytosine Count
1368369 bp
Genome Length
5405719 bp
Protein-coding Genes
4798 genes
Non-Coding Genes
446 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxc | BHF46_00040 | Not Available | Negative | 7190 - 7609 | 15555.6 |
| hypothetical protein | BHF46_00045 | Not Available | Positive | 7668 - 7826 | 5689.82 |
| trna/rrna methyltransferase | BHF46_00050 | Not Available | Positive | 7816 - 8853 | 37800.5 |
| uracil-dna glycosylase | BHF46_00055 | Not Available | Negative | 8901 - 9590 | 25693.6 |
| autonomous glycyl radical cofactor grca | BHF46_00060 | Not Available | Positive | 9895 - 10278 | 14269.0 |
| amino acid transporter | BHF46_00065 | Not Available | Negative | 10334 - 10921 | 21343.6 |
| lysr family transcriptional regulator | BHF46_00070 | Not Available | Positive | 11024 - 11905 | 33338.3 |
| atp-dependent rna helicase srmb | BHF46_00075 | Not Available | Negative | 11938 - 13272 | 49901.0 |
| trna (adenosine(37)-n6)-methyltransferase trmm | BHF46_00080 | Not Available | Positive | 13404 - 14141 | 27315.5 |
| l-aspartate oxidase | BHF46_00085 | Not Available | Negative | 14126 - 15748 | 60224.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





