Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VL119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336104 bp
Thymine Count
1342140 bp
Guanine Count
1359106 bp
Cytosine Count
1368369 bp
Genome Length
5405719 bp
Protein-coding Genes
4798 genes
Non-Coding Genes
446 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escf/yscf/hrpa family type iii secretion system needle major subunit | BHF46_05475 | Not Available | Negative | 1149395 - 1149634 | 9038.44 |
| type iii secretion protein | BHF46_05480 | Not Available | Negative | 1149648 - 1150829 | 45164.6 |
| luxr family transcriptional regulator | BHF46_05485 | Not Available | Positive | 1151087 - 1151587 | 19157.1 |
| invasion protein | BHF46_05490 | Not Available | Positive | 1151589 - 1151882 | 11117.3 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | BHF46_05495 | Not Available | Negative | 1151953 - 1153065 | 43024.9 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | BHF46_05500 | Not Available | Negative | 1153074 - 1153841 | 28208.8 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | BHF46_05505 | Not Available | Negative | 1153843 - 1154103 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | BHF46_05510 | Not Available | Negative | 1154113 - 1154778 | 24496.4 |
| type iii secretion system protein | BHF46_05515 | Not Available | Negative | 1154768 - 1155715 | 36194.4 |
| type iii secretion protein | BHF46_05520 | Not Available | Negative | 1155715 - 1156590 | 33444.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





