Helicobacter pylori strain MG2005-98

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain MG2005-98 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. It is notable for its habitat association with various hosts, including Homo sapiens, Gallus gallus, Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. The strain exhibits a single-cell arrangement and is mobility-restricted. The optimal growth temperature for H. pylori MG2005-98 is 37°C, placing it within the mesophilic temperature range. It possesses a unique cellular structure, featuring two membranes and a single replicon, which is typical for this genus. The bacterium is known for its pathogenic effects in humans, contributing to a range of gastrointestinal diseases and conditions such as chronic gastric inflammation, gastric ulcers, and various forms of gastric cancer, including gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma (MALT lymphoma). The strain is associated with a diverse array of health impacts, from asymptomatic mucosal inflammatory responses to severe conditions like peptic ulcer disease and dyspepsia. Given its extensive host range and pathogenicity, H. pylori MG2005-98 exemplifies the complex interactions between microbial species and their hosts. This relationship underscores the ecological significance of H. pylori in contributing to both health and disease within its host environments. Understanding such dynamics is essential for developing targeted treatments and preventive strategies for the diseases linked to this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain MG2005-98

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain MG2005-98
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain MG2005-98 MG2005-98_Contig088, whole

Gene Summary

Adenine Count

503895 bp

Thymine Count

503541 bp

Guanine Count

324714 bp

Cytosine Count

318464 bp

Genome Length

1650616 bp

Protein-coding Genes

1460 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine triad nucleotide-binding proteinBGL66_06585Not AvailableNegative1352574 - 135288811841.5
phenylalanine--trna ligase subunit alphaBGL66_06590Not AvailablePositive1352970 - 135395638001.8
phenylalanine--trna ligase subunit betaBGL66_06595Not AvailablePositive1353956 - 135625085123.0
3-phosphoshikimate 1-carboxyvinyltransferaseBGL66_06600Not AvailablePositive1356266 - 135755547363.7
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseBGL66_06605Not AvailablePositive1357545 - 135836930932.7
30s ribosomal protein s1BGL66_06610Not AvailablePositive1358490 - 136016062799.1
hypothetical proteinBGL66_06615Not AvailablePositive1360189 - 136072220777.5
phosphoglycerate dehydrogenaseBGL66_06620Not AvailablePositive1360738 - 136231257809.6
menaquinone biosynthesis decarboxylaseBGL66_06625Not AvailablePositive1362322 - 136417270902.3
yggs family pyridoxal phosphate enzymeBGL66_06630Not AvailablePositive1364195 - 136486325023.7

Displaying genes 1251 – 1260 of 1504 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004131(2E)-hexadecenoyl-CoAC37H60N7O17P3SChemical structure of (2E)-hexadecenoyl-CoA4460-95-1
Average999.895Da
Monoisotopic999.297923755Da
BASm0004220(2E)-hexenoyl-CoAC27H40N7O17P3SChemical structure of (2E)-hexenoyl-CoANot available
Average859.629Da
Monoisotopic859.1414231Da

Displaying 1–10 of 17 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total