Mycolicibacterium holsaticum strain M7

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium holsaticum strain M7 is characterized by its rod shape and the presence of flagella. This morphological trait suggests that the organism may possess motility capabilities, which can be significant for its ecological interactions and habitat colonization. The genome of Mycolicibacterium holsaticum strain M7 is organized with a single replicon, indicating a simpler genomic structure compared to species with multiple replicons. This could imply a more streamlined approach to genetic regulation and replication, which may affect its adaptability and evolutionary strategies. The strain is cataloged under the accession MIGZ00000000.1, providing a reference for its genomic information and facilitating further research and identification within the scientific community. In a broader biological context, the combination of rod shape and flagella presence in Mycolicibacterium holsaticum strain M7 may play a crucial role in its ecological niche, potentially allowing for efficient movement in various environments, including soil and aquatic systems. This motility could enhance its ability to access nutrients and evade unfavorable conditions, contributing to its survival and ecological success.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium holsaticum
Strainstrain M7

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium holsaticum strain M7 PROKKA_contig000353, whole

Gene Summary

Adenine Count

951545 bp

Thymine Count

944783 bp

Guanine Count

1924841 bp

Cytosine Count

1927167 bp

Genome Length

5748336 bp

Protein-coding Genes

5158 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoylalanine--d-glutamate ligaseBHQ17_17840Not AvailableNegative3676414 - 367783248408.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseBHQ17_17845Not AvailableNegative3677834 - 367891337860.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseBHQ17_17850Not AvailableNegative3678910 - 368042750720.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseBHQ17_17855Not AvailableNegative3680424 - 368195052516.3
cell division protein ftsiBHQ17_17860Not AvailableNegative3682003 - 368394069086.2
hypothetical proteinBHQ17_17865Not AvailableNegative3683937 - 368489333665.0
16s rrna (cytosine(1402)-n(4))-methyltransferaseBHQ17_17870Not AvailableNegative3684899 - 368587035053.1
cell division/cell wall cluster transcriptional repressor mrazBHQ17_17875Not AvailableNegative3686043 - 368647416009.6
hypothetical proteinBHQ17_17880Not AvailableNegative3686842 - 368724014257.3
gnat family n-acetyltransferaseBHQ17_17885Not AvailablePositive3687467 - 368807222165.4

Displaying genes 3341 – 3350 of 5158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

54 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001758(9Z,12Z)-octadecadienoateC18H31O2Chemical structure of (9Z,12Z)-octadecadienoateNot available
Average279.445Da
Monoisotopic279.2329538Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da

Displaying 1–10 of 54 metabolites

Health Effects

No health effects information available for this bacterium.