Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas arboricola pv. populi strain CFBP 3122, also known as XaplCFBP312292, is a rod-shaped bacterium characterized by the presence of flagella, which are essential for its motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may influence its replication and overall behavior. The strain has been cataloged under the accession MIGV00000000.1, which allows for its identification and study within scientific databases. Understanding the genomic details of Xanthomonas arboricola pv. populi is crucial, especially since this pathogen is known to affect poplar trees, leading to significant ecological and economic consequences. The presence of flagella suggests that this strain can move toward favorable environments or away from harmful conditions, a trait that is vital for its survival and pathogenicity. The rod shape of the bacterium is also characteristic of many genera within the Xanthomonadaceae family, allowing it to adapt to various niches within host plants. In summary, Xanthomonas arboricola pv. populi strain CFBP 3122's rod shape, flagellar motility, and single replicon structure may play critical roles in its pathogenic capabilities and ecological interactions with host plants, particularly in the context of poplar tree diseases. Understanding these traits can aid in developing management strategies for diseases caused by this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas arboricola
Strainpv. populi strain CFBP 3122 XaplCFBP312292

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292


Gene Summary

Adenine Count

825578 bp

Thymine Count

831799 bp

Guanine Count

1567877 bp

Cytosine Count

1559809 bp

Genome Length

4785073 bp

Protein-coding Genes

3851 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n(4)-(beta-n-acetylglucosaminyl)-l-asparaginaseXaplCFBP3122_03810Not AvailableNegative837125 - 83818937261.6
alanine acetyltransferaseXaplCFBP3122_03815Not AvailableNegative838392 - 83896421096.5
chemotaxis protein chewXaplCFBP3122_03820Not AvailableNegative839201 - 83967716932.6
chemotaxis proteinXaplCFBP3122_03825Not AvailableNegative839713 - 84090040760.7
hybrid sensor histidine kinase/response regulatorXaplCFBP3122_03830Not AvailableNegative840908 - 847546237161.0
chemotaxis proteinXaplCFBP3122_03835Not AvailableNegative847660 - 84969671295.0
chemotaxis protein chewXaplCFBP3122_03840Not AvailableNegative849736 - 85026619952.9
response regulatorXaplCFBP3122_03845Not AvailableNegative850266 - 85062813184.0
response regulatorXaplCFBP3122_03850Not AvailableNegative850646 - 85104714681.9
glutathione synthaseXaplCFBP3122_03855Not AvailablePositive851288 - 85223834302.4

Displaying genes 801 – 810 of 3978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.