Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas arboricola pv. populi strain CFBP 3122, also known as XaplCFBP312292, is a rod-shaped bacterium characterized by the presence of flagella, which are essential for its motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may influence its replication and overall behavior. The strain has been cataloged under the accession MIGV00000000.1, which allows for its identification and study within scientific databases. Understanding the genomic details of Xanthomonas arboricola pv. populi is crucial, especially since this pathogen is known to affect poplar trees, leading to significant ecological and economic consequences. The presence of flagella suggests that this strain can move toward favorable environments or away from harmful conditions, a trait that is vital for its survival and pathogenicity. The rod shape of the bacterium is also characteristic of many genera within the Xanthomonadaceae family, allowing it to adapt to various niches within host plants. In summary, Xanthomonas arboricola pv. populi strain CFBP 3122's rod shape, flagellar motility, and single replicon structure may play critical roles in its pathogenic capabilities and ecological interactions with host plants, particularly in the context of poplar tree diseases. Understanding these traits can aid in developing management strategies for diseases caused by this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas arboricola
Strainpv. populi strain CFBP 3122 XaplCFBP312292

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292,

Gene Summary

Adenine Count

825578 bp

Thymine Count

831799 bp

Guanine Count

1567877 bp

Cytosine Count

1559809 bp

Genome Length

4785073 bp

Protein-coding Genes

3851 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-sigma f factorXaplCFBP3122_20545Not AvailablePositive4701127 - 470155815496.7
anti-sigma factor antagonistXaplCFBP3122_20550Not AvailablePositive4701555 - 470197415312.7
had family hydrolaseXaplCFBP3122_20555Not AvailablePositive4702217 - 470283722122.6
rna-binding proteinXaplCFBP3122_20560Not AvailableNegative4703387 - 470379415046.0
mate family efflux transporterXaplCFBP3122_20565Not AvailablePositive4704083 - 470555851848.9
50s ribosomal protein l19XaplCFBP3122_20570Not AvailableNegative4705884 - 470629114738.8
trna (guanosine(37)-n1)-methyltransferase trmdXaplCFBP3122_20575Not AvailableNegative4706436 - 470719427876.2
ribosome maturation factor rimmXaplCFBP3122_20580Not AvailableNegative4707267 - 470777919243.0
30s ribosomal protein s16XaplCFBP3122_20585Not AvailableNegative4707824 - 47080849633.59
hypothetical proteinXaplCFBP3122_20590Not AvailableNegative4708182 - 470897928534.4

Displaying genes 3901 – 3910 of 3978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.