Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas arboricola pv. populi strain CFBP 3122, also known as XaplCFBP312292, is a rod-shaped bacterium characterized by the presence of flagella, which are essential for its motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may influence its replication and overall behavior. The strain has been cataloged under the accession MIGV00000000.1, which allows for its identification and study within scientific databases. Understanding the genomic details of Xanthomonas arboricola pv. populi is crucial, especially since this pathogen is known to affect poplar trees, leading to significant ecological and economic consequences. The presence of flagella suggests that this strain can move toward favorable environments or away from harmful conditions, a trait that is vital for its survival and pathogenicity. The rod shape of the bacterium is also characteristic of many genera within the Xanthomonadaceae family, allowing it to adapt to various niches within host plants. In summary, Xanthomonas arboricola pv. populi strain CFBP 3122's rod shape, flagellar motility, and single replicon structure may play critical roles in its pathogenic capabilities and ecological interactions with host plants, particularly in the context of poplar tree diseases. Understanding these traits can aid in developing management strategies for diseases caused by this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas arboricola
Strainpv. populi strain CFBP 3122 XaplCFBP312292

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292,

Gene Summary

Adenine Count

825578 bp

Thymine Count

831799 bp

Guanine Count

1567877 bp

Cytosine Count

1559809 bp

Genome Length

4785073 bp

Protein-coding Genes

3851 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dehydrogenaseXaplCFBP3122_15790Not AvailableNegative3526863 - 352766328853.2
triose-phosphate isomeraseXaplCFBP3122_15795Not AvailablePositive3527777 - 352853226567.7
preprotein translocase subunit secgXaplCFBP3122_15800Not AvailablePositive3528566 - 352903915828.2
Trna-leuNot AvailableNot AvailablePositive3529089 - 3529173Not Available
nadh-quinone oxidoreductase subunit aXaplCFBP3122_15810Not AvailablePositive3529276 - 352963213598.1
nadh-quinone oxidoreductase subunit bXaplCFBP3122_15815Not AvailablePositive3529623 - 353017720429.1
nadh-quinone oxidoreductase subunit cXaplCFBP3122_15820Not AvailablePositive3530214 - 353096627904.5
nadh-quinone oxidoreductase subunit dXaplCFBP3122_15825Not AvailablePositive3530963 - 353227049474.5
nadh-quinone oxidoreductase subunit eXaplCFBP3122_15830Not AvailablePositive3532267 - 353279419553.3
nadh oxidoreductase (quinone) subunit fXaplCFBP3122_15835Not AvailablePositive3532798 - 353413248133.6

Displaying genes 3041 – 3050 of 3978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.