Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas arboricola pv. populi strain CFBP 3122, also known as XaplCFBP312292, is a rod-shaped bacterium characterized by the presence of flagella, which are essential for its motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may influence its replication and overall behavior. The strain has been cataloged under the accession MIGV00000000.1, which allows for its identification and study within scientific databases. Understanding the genomic details of Xanthomonas arboricola pv. populi is crucial, especially since this pathogen is known to affect poplar trees, leading to significant ecological and economic consequences. The presence of flagella suggests that this strain can move toward favorable environments or away from harmful conditions, a trait that is vital for its survival and pathogenicity. The rod shape of the bacterium is also characteristic of many genera within the Xanthomonadaceae family, allowing it to adapt to various niches within host plants. In summary, Xanthomonas arboricola pv. populi strain CFBP 3122's rod shape, flagellar motility, and single replicon structure may play critical roles in its pathogenic capabilities and ecological interactions with host plants, particularly in the context of poplar tree diseases. Understanding these traits can aid in developing management strategies for diseases caused by this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas arboricola
Strainpv. populi strain CFBP 3122 XaplCFBP312292

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas arboricola pv. populi strain CFBP 3122 XaplCFBP312292,

Gene Summary

Adenine Count

825578 bp

Thymine Count

831799 bp

Guanine Count

1567877 bp

Cytosine Count

1559809 bp

Genome Length

4785073 bp

Protein-coding Genes

3851 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine--fructose-6-phosphate transaminase (isomerizing)XaplCFBP3122_05530Not AvailableNegative1248415 - 125024465940.2
efflux transporter periplasmic adaptor subunitXaplCFBP3122_05535Not AvailablePositive1250449 - 125172045098.5
abc transporter atp-binding proteinXaplCFBP3122_05540Not AvailablePositive1251758 - 125247726247.4
abc transporter atp-binding proteinXaplCFBP3122_05545Not AvailablePositive1252490 - 125379148077.9
abc transporter permeaseXaplCFBP3122_05550Not AvailablePositive1253847 - 125507945008.2
sigma-54-dependent fis family transcriptional regulatorXaplCFBP3122_05555Not AvailablePositive1255337 - 125668048655.0
atp-binding proteinXaplCFBP3122_05560Not AvailablePositive1256689 - 125804150615.1
hypothetical proteinXaplCFBP3122_05565Not AvailableNegative1258038 - 125900934614.5
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseXaplCFBP3122_05570Not AvailableNegative1259120 - 126048447828.4
gtra family proteinXaplCFBP3122_05575Not AvailablePositive1260630 - 126101313869.4

Displaying genes 1121 – 1130 of 3978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.