Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 is characterized as a rod-shaped bacterium. It possesses a single replicon, which indicates a streamlined genomic organization that may facilitate efficient replication and cellular function. The strain is cataloged under the accession number MIAL00000000.1, which serves as a reference for its genetic and genomic information. The rod shape of Sphingopyxis sp. suggests a potential adaptation to its ecological niche, allowing for movement and interaction in various environments, particularly in aquatic settings where many members of the Sphingopyxis genus are typically found. This morphology may also play a role in biofilm formation or surface attachment, which are common traits among environmental bacteria that contribute to nutrient cycling and ecosystem dynamics. Understanding the specific traits of Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 can provide insights into its ecological role. Given the genus Sphingopyxis is known for its ability to degrade complex organic compounds, this strain may contribute to bioremediation processes or nutrient recycling in its habitat. The single replicon characteristic may suggest an adaptation to stable environments where rapid genomic changes are less critical, potentially allowing for specialization in metabolic pathways that support its ecological functions. Overall, the traits of Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 highlight its role in maintaining ecological balance through its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24


Gene Summary

Adenine Count

843591 bp

Thymine Count

835115 bp

Guanine Count

1602391 bp

Cytosine Count

1614918 bp

Genome Length

4897659 bp

Protein-coding Genes

4481 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l18A2885_03765Not AvailableNegative806187 - 80654012441.0
50s ribosomal protein l6A2885_03770Not AvailableNegative806544 - 80707719336.4
30s ribosomal protein s8A2885_03775Not AvailableNegative807077 - 80748114722.9
30s ribosomal protein s14A2885_03780Not AvailableNegative807494 - 80779911648.4
maeblA2885_08515Not AvailableNegative807871 - 80860826175.2
hypothetical proteinA2885_08520Not AvailableNegative808838 - 80917311788.7
duf1328 domain-containing proteinA2885_08525Not AvailablePositive810078 - 8102515803.61
hypothetical proteinA2885_08530Not AvailableNegative810407 - 81223065012.0
hypothetical proteinA2885_08535Not AvailablePositive812452 - 81307221528.3
dna-binding response regulatorA2885_08540Not AvailablePositive813206 - 81394026867.3

Displaying genes 831 – 840 of 4571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.