Stygiobacter sp. RIFOXYB2_FULL_37_11

Kingdom

Pseudomonadati

Phylum

Ignavibacteriota

Class

Ignavibacteria

Order

Ignavibacteriales

Family

Melioribacteraceae

Genus

Stygiobacter

Description

Stygiobacter sp. RIFOXYB2_FULL_37_11 is a bacterium characterized by a single replicon, which simplifies its genomic organization. The accession number for this strain is MHAU00000000.1, indicating that its genomic information is accessible for further study. The classification of Stygiobacter sp. suggests it is part of an ecological niche where it plays a specific role, likely in the breakdown of organic materials or in biogeochemical cycling due to its position within the broader context of microbial diversity. While specific metabolic pathways or ecological interactions are not detailed, the presence of a single replicon may indicate streamlined evolutionary adaptations that confer advantages in its environmental niche. Overall, the genomic simplicity of Stygiobacter sp. RIFOXYB2_FULL_37_11 may reflect a specialization that permits efficient resource utilization in its habitat, contributing to our understanding of microbial ecology and the dynamics of microbial communities. Further research could elucidate its functional capabilities and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumIgnavibacteriota
ClassIgnavibacteria
OrderIgnavibacteriales
FamilyMelioribacteraceae
GenusStygiobacter
SpeciesStygiobacter sp. RIFOXYB2_FULL_37_11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Stygiobacter sp. RIFOXYB2_FULL_37_11

Gene Summary

Adenine Count

1354729 bp

Thymine Count

1351719 bp

Guanine Count

817718 bp

Cytosine Count

818209 bp

Genome Length

4346285 bp

Protein-coding Genes

3738 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxybutyrate coa-transferaseA2299_01800Not AvailablePositive3346559 - 334786347884.9
diadenosine tetraphosphataseA2299_01805Not AvailablePositive3347868 - 334856326558.7
hypothetical proteinA2299_01810Not AvailablePositive3348746 - 334981640210.8
hypothetical proteinA2299_01815Not AvailablePositive3349819 - 335056829682.3
cell surface protein spraA2299_01825Not AvailablePositive3351216 - 3358388269026.0
response regulatorA2299_01830Not AvailablePositive3358559 - 336013061042.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeA2299_01835Not AvailablePositive3360130 - 336055816377.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabA2299_01840Not AvailablePositive3360551 - 336120724203.5
hypothetical proteinA2299_01845Not AvailablePositive3361204 - 336193226288.8
acetyl-coa carboxylase subunit betaA2299_01850Not AvailablePositive3361932 - 336277431244.1

Displaying genes 2931 – 2940 of 3785 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.