Lysobacteraceae bacterium SCN 69-123 ABS96_C0081

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Description

Lysobacteraceae bacterium SCN 69-123, identified by the accession number MEFO00000000.1, is a member of the Lysobacteraceae family. This bacterium is characterized by having a single replicon, which is indicative of its genomic organization and stability. The presence of a single replicon can influence the bacterium's replication and gene expression mechanisms, impacting its adaptability and survival in various environments. The Lysobacteraceae family is generally known for its diverse metabolic capabilities, often involving the degradation of organic compounds and the production of antimicrobial substances. This characteristic suggests that Lysobacteraceae bacterium SCN 69-123 may play a role in nutrient cycling and could potentially contribute to soil health or plant growth through its interactions with other microorganisms. While specific traits such as metabolic pathways or ecological interactions are not detailed in the provided data, the nature of the Lysobacteraceae family implies potential applications in biocontrol or bioremediation. Understanding the traits of SCN 69-123 could provide insights into its ecological role, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, Lysobacteraceae bacterium SCN 69-123 is characterized by its single replicon and is part of a family known for its beneficial metabolic processes. Further research could elucidate its specific ecological functions and potential applications in agriculture or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Lysobacteraceae bacterium SCN 69-123 ABS96_C0081, whole

Gene Summary

Adenine Count

1311485 bp

Thymine Count

1316120 bp

Guanine Count

2932314 bp

Cytosine Count

2929926 bp

Genome Length

8489846 bp

Protein-coding Genes

6338 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase factor sigma-54ABS96_03680Not AvailableNegative259264 - 26068251069.9
lps export abc transporter atp-binding proteinABS96_03685Not AvailableNegative260725 - 26144426080.5
lipopolysaccharide transport periplasmic protein lptaABS96_03690Not AvailableNegative261444 - 26197418766.2
lps export abc transporter periplasmic protein lptcABS96_03695Not AvailableNegative261952 - 26252720904.7
phenylphosphate carboxylase subunit deltaABS96_03700Not AvailableNegative262524 - 26307219388.4
d-arabinose 5-phosphate isomeraseABS96_03705Not AvailableNegative263136 - 26413734825.0
bola family transcriptional regulatorABS96_03710Not AvailablePositive264190 - 2644207803.42
udp-n-acetylglucosamine 1-carboxyvinyltransferaseABS96_03715Not AvailablePositive264454 - 26572544625.4
hypothetical proteinABS96_03720Not AvailablePositive265722 - 26604212184.5
outer membrane protein assembly factor bamdABS96_03725Not AvailableNegative266325 - 26720933428.5

Displaying genes 221 – 230 of 6338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.