Lysobacteraceae bacterium SCN 69-123 ABS96_C0081

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Description

Lysobacteraceae bacterium SCN 69-123, identified by the accession number MEFO00000000.1, is a member of the Lysobacteraceae family. This bacterium is characterized by having a single replicon, which is indicative of its genomic organization and stability. The presence of a single replicon can influence the bacterium's replication and gene expression mechanisms, impacting its adaptability and survival in various environments. The Lysobacteraceae family is generally known for its diverse metabolic capabilities, often involving the degradation of organic compounds and the production of antimicrobial substances. This characteristic suggests that Lysobacteraceae bacterium SCN 69-123 may play a role in nutrient cycling and could potentially contribute to soil health or plant growth through its interactions with other microorganisms. While specific traits such as metabolic pathways or ecological interactions are not detailed in the provided data, the nature of the Lysobacteraceae family implies potential applications in biocontrol or bioremediation. Understanding the traits of SCN 69-123 could provide insights into its ecological role, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, Lysobacteraceae bacterium SCN 69-123 is characterized by its single replicon and is part of a family known for its beneficial metabolic processes. Further research could elucidate its specific ecological functions and potential applications in agriculture or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Lysobacteraceae bacterium SCN 69-123 ABS96_C0081, whole

Gene Summary

Adenine Count

1311485 bp

Thymine Count

1316120 bp

Guanine Count

2932314 bp

Cytosine Count

2929926 bp

Genome Length

8489846 bp

Protein-coding Genes

6338 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylaseABS96_13085Not AvailableNegative2493113 - 249469356504.3
atp-binding proteinABS96_13090Not AvailablePositive2494815 - 249632053692.0
hypothetical proteinABS96_13095Not AvailablePositive2496361 - 249765347810.5
rhomboid family intramembrane serine proteaseABS96_13100Not AvailableNegative2497699 - 249915953378.7
transcription elongation factor grebABS96_13105Not AvailablePositive2499262 - 249976818846.3
hypothetical proteinABS96_13110Not AvailableNegative2499923 - 250073229349.3
ribosomal protein s12 methylthiotransferaseABS96_13115Not AvailableNegative2500783 - 250214449882.6
carboxymethylenebutenolidaseABS96_13120Not AvailablePositive2502287 - 250294623140.5
diadenosine tetraphosphate hydrolaseABS96_13125Not AvailablePositive2502943 - 250336515651.8
dctp deaminaseABS96_13130Not AvailableNegative2503636 - 250420821591.6

Displaying genes 2051 – 2060 of 6338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.